Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1540 |
Symbol | |
ID | 4669626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1706492 |
End bp | 1707463 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639822742 |
Product | periplasmic binding protein |
Protein accession | YP_969903 |
Protein GI | 120610225 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000147526 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.3063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCGGT GGTGCCGCGT CATTCCTTTC CTGCAGCGCC TGGGGGCGAT GGCCCTGCTG GCATGGTCCG CCGGCGCGCA GGGGCCGGCC CTGGCGCAGC TGCCGCCGGG GCCCGCGACC GCGGTCTCTG CGGCCTCCGC GGTGCCCGAT GCTCCCGCGG GCGGCGTGGC GATCACCGAC GGCCGCGGCC GCCGCATCGC CTTCGCCCGG CCGCCGCAGC GCATCGTGAG CCTGCTGCCC TCGCTCACCG AATCGGTCTG CGCGCTGCAG CAGTGCGCGC GGCTGGTGGG CGTGGACCGC TATTCCAACT GGCCCGAGTC CGTGCGCACG CTGCCGCAGA TGGGTGGCGG CATCGACCCC AACATCGAGG CCATCGCCGC CCAGCGGCCG GACGTGGTGC TGCTGGCGAC CAGCTCGCGC GCGAGCGACC GGCTGGAGGC GCTGGGCATC CCCGTGGTGG CGCTGGAGCC CAAGACGCAT GCCGACGTGC GCGAGGTGCT GCGCACCCTG GGCACGCTGC TGGCCGTGCC GCCGCCGCAG GGTGCCGACC GCGTGTGGCG CGAGATCGAC GCGGGCGTGC AGGCGGCCGC GCAGTCGCTG CCGGAGCGCG CGCGCGGCGC GCGCGTGTAC TTCGAAGTGA GCCGGGGGCC CTATGCGGCC GGCACGTCGT CCTTCATCGG CGAGACGCTG GCCCGCCTGG GCGCGCGCAA CGTGGTGCCG CCCGAACTGG GGCCGTTCCC GCGACTGAAC CCCGAATTCG TCGTGCGGGC GCAGCCGGAC ATCATCATGG TGGGCAACAG CAGCATGCAG GCCCTGGTGC CGTACCCGGG CTGGGACAGC CTGCGCGCGG TGCAGGGGCA GCGTGTCTGC GTGTTCTCCC CGCGCGAGGC CGACGTGGCG GTGCGCCCCG GCCCGCGCAT GGCGGATGCC GCGCGCATCA TGGCGCGCTG CCTCGCGGAC AAGGCGCCAT GA
|
Protein sequence | MNRWCRVIPF LQRLGAMALL AWSAGAQGPA LAQLPPGPAT AVSAASAVPD APAGGVAITD GRGRRIAFAR PPQRIVSLLP SLTESVCALQ QCARLVGVDR YSNWPESVRT LPQMGGGIDP NIEAIAAQRP DVVLLATSSR ASDRLEALGI PVVALEPKTH ADVREVLRTL GTLLAVPPPQ GADRVWREID AGVQAAAQSL PERARGARVY FEVSRGPYAA GTSSFIGETL ARLGARNVVP PELGPFPRLN PEFVVRAQPD IIMVGNSSMQ ALVPYPGWDS LRAVQGQRVC VFSPREADVA VRPGPRMADA ARIMARCLAD KAP
|
| |