| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1488 |
|---|
| Symbol | |
|---|
| ID | 4669051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1648610 |
|---|
| End bp | 1649500 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639822691 |
|---|
| Product | glutamate racemase |
|---|
| Protein accession | YP_969852 |
|---|
| Protein GI | 120610174 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0796] Glutamate racemase |
|---|
| TIGRFAM ID | [TIGR00067] glutamate racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.044045 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCAG CCACGCAGCG CCCCATCGGC GTGTTCGACA GCGGCGTCGG CGGCCTGAGC
GTGCTGCGCG CGCTGCGTGC CGAACTGCCG CACGAGCGCT TCGTCTATCT GGCCGACAGC
GGCAATGCGC CCTACGGCGA ACGCGGCGAT GCCTATGTGG CCGCGCGCAC CCACGCCATC
GCCGGGTATC TGCAGCGAAC GCACGGCATC AAGGCCCTGG TCGTGGCCTG CAACACGGCG
ACCGCGGCCG CCATCCATGA AGTCCGCGCA CGGCATGCCG ACCTGCCGCT GGTAGGGGTG
GAGCCCGCCC TCAAGCCCGC GCTGTCCCTG ACGCGCACCG GCCGGGTGGG CGTGATCGGG
ACGCGCGGGA CGTTGTCGAG CGCCAAGTTC CAGCGCCTGC GGGCATCGCT GCAAGGCCCC
GTCGAGTTCG TGGTGCAGCC CTGCGACGGG CTGGCCCACG CCATCGAGCG CAGCACGGCC
GACACCCTTC CCGACGATCC TGCGACGGCC GAGATCCGCG CGCTCTGCGC CCGGTACATG
GCAGCGCTCG GTCCTTTCGG CGCCGCGCCC GGGGAGATCG ACACGCTCGT GCTGGGCTGC
ACGCACTACC TCTTCGCCGA GGATGCGCTG CGAGCGCACA CCGGCCCGCA GGTGCGCCTG
GTGGAGACGG GCGAGCCCGT GGCGCGCCAG ACGCGCCGGC TGCTCGAAGC GGCCGGCGCC
CTGGCCGCGG CCACCGTTCC GGCCACGGGC ACCACGAGCC TCTTCACGAC AGGAGCCCTG
CCCCTGCTGC AGGCGGCCGC ACACCGCTGG CTGCAGTTGC CGGCATCGGC ATGCGCCCTG
GTCGAGGTAC CTCAGGAAGC GGCCGGCGAA TGGTTGGGAA CGGGAACCTG A
|
|---|
| Protein sequence | MTSATQRPIG VFDSGVGGLS VLRALRAELP HERFVYLADS GNAPYGERGD AYVAARTHAI
AGYLQRTHGI KALVVACNTA TAAAIHEVRA RHADLPLVGV EPALKPALSL TRTGRVGVIG
TRGTLSSAKF QRLRASLQGP VEFVVQPCDG LAHAIERSTA DTLPDDPATA EIRALCARYM
AALGPFGAAP GEIDTLVLGC THYLFAEDAL RAHTGPQVRL VETGEPVARQ TRRLLEAAGA
LAAATVPATG TTSLFTTGAL PLLQAAAHRW LQLPASACAL VEVPQEAAGE WLGTGT
|
|---|
| |