| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1482 |
|---|
| Symbol | |
|---|
| ID | 4666886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1640211 |
|---|
| End bp | 1642988 |
|---|
| Gene Length | 2778 bp |
|---|
| Protein Length | 925 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639822685 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_969847 |
|---|
| Protein GI | 120610169 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA TCAGCCGGCA AGCCCTTTTC GGCAAGCTCA ATCCCCTGCT CTTCAAGTCG
CTGGAAAGCG CGACCGTGTT CTGCAAGCTG CGCGGCAATC CCTACGTGGA GCTGGTGCAC
TGGCTGCACC AGCTGCTGCA GGAGACGGAT TCCGACCTGA TCCGGCTGCT GCGCCACTTC
GCGGTGGATT CCGACCGGCT CGCCACCGAC GTGCTGCAGA GCCTGGACCG GCTGCCGCGC
GGCGCCACGT CGATCAGCGA TTTCTCGGCG CAGATCGAAT CCTCGATCGA ACGCGGCTGG
GTGTACGCCA CGCTGATGTA CGGCGAATCG CAGATCCGCA GCGCCTACTG GCTCTCGGGC
ATGCTGCGCA CGCGCGTGCT GGCCAACGAG CTGCGCGCGA TTTCGGGGGA ATTCAACAAG
CTGGGCGAGC CTGCCCTGAG CGAGGTGTTC GGCCGCGTGC TGCCGGATTC GCCGGAATCG
CGCCTGAAGG CCGCGGACGG CAGCGGCCTG GGCGGCGTGC CCGGCGAGGC GAGCGGCGCC
ACTGCCGAGG CGGCCGGGCC CGGCGAGGCC CTGAAGCGTT ACACGGTGGA CCTGACGGAG
CGCGCGCGCC TGCAGGAACT CGACCCGGTC ACCGGCCGCG ACGAGGAAGT GCGCCAGATG
GTGGACATCC TCATGCGCCG GCGTCAGAAC AACCCCATCC TGGTCGGCGA GGCCGGCGTG
GGCAAGACGG CGGTGGTGGA AGGCCTCGCG CTGCGCATCG CGGCGGGCGA CGTGCCGCCA
CCGCTCAAGG ACGTGCAACT GCGCGTGGTG GACATCGGCC TGCTGCAGGC CGGCGCGAGC
ATGAAGGGCG AGTTCGAGAA CCGCCTGCGC TCGCTGCTCG ACGAGGTGCA GGCCAGCACG
GTGCCGATCG TGCTGTTCAT CGACGAGGTG CACACGCTCG TCGGCGCGGG CGGGCAGGCA
GGCACGGGCG ATGCCGCCAA CCTGCTCAAG CCGGCGCTGG CGCGCGGCGT GCTGCGCACC
ATCGGCGCCA CCACCTGGGC CGAGTACAAG AAATACATCG AGAAGGACCC GGCGCTCACC
CGGCGCTTCC AGCTCGTGCA GATCCACGAG CCGGACGAGG CCAAGGCGGT GCACATGCTG
CGCGGCGTGG CCGCGAAGCT GGAAGGCCAT CACAAGGTGC GTATCGGCGA GGACGCCGTG
GCTGCGGCGG TGACGCTGTC GCACCGCTAC ATCCCGTCGC GCCAGCTGCC CGACAAGGCC
GTGAGCCTGC TGGACACCGC GTGCTCGCGC GTGGCGCTGG GCCTGCACGC GACGCCGGCG
CGGCTGGAGT CGGTGGTGCG TCAGCTGGAG GCGCTCGAGG TCGAGAAGGA CATCGTGCAG
CGCGAGCTGG GCCTGGGCGT GGGCGACGCC GGCCGCTTCG CCGACATCGG CACCGCGATC
GAGCGCCTGC TGGCCGAAAA GGCCGAATTG CAGGAGCGGT TCGAACGCGA GAAGGTGCTG
GTGCAGCAGA TCGTGGACGC GGAGGCGGCG TTGCTGAAGC CGGCCGGCAA GCCCGGGGCA
GCCGGGGCGG CGCAGGCGCC TGCCCCGGCA ACCGCGCCGG CCCATGCATC GGAGGCCTCC
GGAGAAGCCG GCAGCGGCGG GGCGGCTGCC GCCGGTACGG CACAGGGCGC GGCGGTGTCC
CCGGGCGTCG CCACTCCCGA GGCGCTGGCT GCGCTGCGCC AGGACCTGGC GCGCCTGCAG
GGCGAAGATC CGCTGCTGCA GCCCGTCGTG GATGCGAGCG TGGTGGCTGC GGTGGTGGCC
GAATGGACGG GCATCCCCGT GGGCCGCATG GTGCGCGACG AGGTGCAGTC CGTGCTGACG
CTCGCCGATA CGCTGGAGAA GCGGGTGATC GGCCAGCGCC ACGGCCTGGA GGCGATCACG
CGCCGCATCC AGACCGCGCG TGCCCAGCTG GACAACCCCG GCAAGCCCAT CGGCGTGTTC
CTGCTGGCCG GGCCCTCGGG CGTCGGCAAG ACGGAGACCG CGCTGTCGCT GGCCGAGGCG
CTGTACGGTG GCGAGCAGAA CCTCATCACC ATCAACATGA GCGAATACCA GGAGGCCCAC
ACGGTCTCCA CGCTCAAGGG CGCGCCGCCC GGCTACGTGG GCTACGGCGA AGGCGGCGTG
CTGACCGAGG CCGTGCGCCG CCGCCCCTAC AGCGTGGTGC TGCTCGACGA GATCGAGAAG
GCCCACCCGG ACGTGCACGA GCTGTTCTTC CAGGTGTTCG ACAAGGGCTG GATGGAAGAC
GGCGAGGGGC GCTACATCGA TTTCAAGAAC ACGGTCATCA TCCTGACTTC CAACGTGGGC
TCGGAGCTGA TCGCCGGCAT GTGCCGGGAT CCGGAGCTGG CGCCCCAGCC CGAGGCACTG
GCCCAGGCGG TGCGCAAGCC GCTGCTGGAG AAATTCCCGG CCGCGCTGCT GGGCCGGCTG
GTGGTGGTGC CGTACTACCC GATCTCGGAC GCGATGCTCG AGCAGATCAT CCGCCTGCAG
CTGCAGCGCA TCCAGACGCG CATCGCCGAG CGCCACGGCG CCGTGCTGGA CATCGACGAT
GCGGCCGTGC AGCTCATTCG CCAGCGCTGC ACCGAGGTGG AATCCGGCGC CCGGATGGTG
GACGGAATCA TCACCCAGAA CCTGCTGCCG CGGCTGGCGA TGCGCTTCCT GCAGAGCTCT
GTCGATTCGA AGTCGATCCG CCGCATCCGC CTCGGCGTGG CGGACAGCGA TTTCGCCATC
GAGTACGAAG AGGCCTGA
|
|---|
| Protein sequence | MSEISRQALF GKLNPLLFKS LESATVFCKL RGNPYVELVH WLHQLLQETD SDLIRLLRHF
AVDSDRLATD VLQSLDRLPR GATSISDFSA QIESSIERGW VYATLMYGES QIRSAYWLSG
MLRTRVLANE LRAISGEFNK LGEPALSEVF GRVLPDSPES RLKAADGSGL GGVPGEASGA
TAEAAGPGEA LKRYTVDLTE RARLQELDPV TGRDEEVRQM VDILMRRRQN NPILVGEAGV
GKTAVVEGLA LRIAAGDVPP PLKDVQLRVV DIGLLQAGAS MKGEFENRLR SLLDEVQAST
VPIVLFIDEV HTLVGAGGQA GTGDAANLLK PALARGVLRT IGATTWAEYK KYIEKDPALT
RRFQLVQIHE PDEAKAVHML RGVAAKLEGH HKVRIGEDAV AAAVTLSHRY IPSRQLPDKA
VSLLDTACSR VALGLHATPA RLESVVRQLE ALEVEKDIVQ RELGLGVGDA GRFADIGTAI
ERLLAEKAEL QERFEREKVL VQQIVDAEAA LLKPAGKPGA AGAAQAPAPA TAPAHASEAS
GEAGSGGAAA AGTAQGAAVS PGVATPEALA ALRQDLARLQ GEDPLLQPVV DASVVAAVVA
EWTGIPVGRM VRDEVQSVLT LADTLEKRVI GQRHGLEAIT RRIQTARAQL DNPGKPIGVF
LLAGPSGVGK TETALSLAEA LYGGEQNLIT INMSEYQEAH TVSTLKGAPP GYVGYGEGGV
LTEAVRRRPY SVVLLDEIEK AHPDVHELFF QVFDKGWMED GEGRYIDFKN TVIILTSNVG
SELIAGMCRD PELAPQPEAL AQAVRKPLLE KFPAALLGRL VVVPYYPISD AMLEQIIRLQ
LQRIQTRIAE RHGAVLDIDD AAVQLIRQRC TEVESGARMV DGIITQNLLP RLAMRFLQSS
VDSKSIRRIR LGVADSDFAI EYEEA
|
|---|
| |