Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1473 |
Symbol | |
ID | 4669777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1627945 |
End bp | 1631574 |
Gene Length | 3630 bp |
Protein Length | 1209 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639822676 |
Product | ImcF domain-containing protein |
Protein accession | YP_969838 |
Protein GI | 120610160 |
COG category | [S] Function unknown |
COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCA AGATCTTTTC ATTCTTCTTC AACCGGTTCA CGCTGGTGCT GTGCGGCCTG GTGCTGCTCA GCCTGCTGGT CTGGTTCGTC GGTCCGCTGG TCTATATCAA GCCCTACCAG CCGCTCGAGA GCGAGGCGGT GCGCGGCTGG ATCATCGCCG CGCTGTTCGG CATCTGGTTC CTGCGGCTGT TCATCCGGTG GTGGCGGGCC AAGGAGATGA ATGCACGCCT GCTGGGCCAG CTGGCCCGCA TCGGCGCATC GGATGCCTCC GCCCCCGAGG CCGGTCCCGG CAAGGAGGAG GTGGCCGAAC TCGAGAAGCG CTTCAAGGAG GCGGTCGATG TCCTGGGCAA GACCCGCTTC GGGCAGACGG AGCAGGGCTG GTTCGGCCGG CTGTCCCGCC GCTACCTCTA CCAGTTGCCC TGGTACCTCA TCATCGGTTC TCCGGGATCC GGCAAGACCA CGGCACTGGT CAATTCGGGC CTCGATTTTC CTCTGGCCGC CCAGTTCGGC AAGGCGTCGA TCCGCGGCGT CGGCGGCACG CGCAACTGCG ACTGGTGGTT CACCGACCAG GCCGTGCTGC TGGATACCGC CGGCCGCTAC ACCACGCAGG AGAGCGACGA GGCGCAGGAC AGTGCCGCCT GGTCGGGGTT CCTCGGCCTG CTGCGGCGCT TTCGCGGGCG GCAGCCCATC AACGGGGTGC TGGTCACCCT CAGCGTGCAG GAGCTGCTGA GCGGCGGCGA TGCGGAGCGC GAGCGCCTGG CCCGGCTGAT CGGCCTGCGC CTGGCCGAGC TGTGCGAGGG GCTGTCCATC AAGTTCCCGG TGTACGTGCT GGTCACCAAG ACCGACCTGC TGGCCGGCTT CAACGAGTTC TTCGGCAACA TGACCCGCGA GGAGCGGGCA CAGGTCTGGG GCTTCACCAA TCCCTATGTG GAAGGGCAGG CGCAGGAAGA CCCGGGGCTG CAGTTCCGCA AGGAATTCGA CGGCCTGGCC GACCAGATCA ACCGGTTGCT GCCGCAGCGC CTGCTGGCGG AGCCCGACCT CGCGCGCCGT GGCCAGATCT ATGGCCTGCC GCAGCAGTTC GTCGGCCTGC GGGACGTGGT CCAGCAGACG CTGTCCACGA TCTTCGCGTC CTCGCGTTTC AAGGAAAAGC CGCTGTTCCG CGGCGTCTAT TTCACCAGTG GCACGCAGGA GGGCATGCCG TTCGACCGGG TGCTGTCCGC CCTGTCGCGG CGCTTCTCGG TGGCGCCTCC GGCCCATCCC GCCGGGGAAG GGCGCGCGGG CAAGAGCTAT TTCATCGAGA CCCTGCTCAA GGGGGTCATC TTCAACGAGG CCGGGCTGAC GGGACGCAAT GCCAAGAAGG AGCGCCAGTT GCGGCTGCTG CAGGCCGCCG GCTTTTTCGC CCTGGCCGCG GGGCTGGCGG GCGCCACGAT CGCCTGGACG ATCAGCCACG GCAACAACCA GAAATACCTG GACGAGGTGG CCGCGAAGGT GCCCACGCTC AAGCAGGCGG TGGAGGAATC CCGCGACGCG GATCCCGAGA ACATGGTGGC GCTGCTGCCG CTGCTGAACC ACGCCGAGGC CCTCGCCGTG AGCCAGCGCT ACACCGGCGA TTCGCCGCCG CTCAGCTGGC GCTACGGATT GCTGCAGGTG CCCAAGGTGC AGACCGCTGC CGACGCGACC TACATGCGGC TGCTGGAGGA TGCGTGGCTG CCCCGCCTCG CGCGGCACCT GCGCAATTCG CTGCAGCAGG CCTCGACGGC CAACCCCGAG GCCAGCTACG AGGCGCTCAA GGTCTATCTG ATGCTCTACG ATCCGGAGCG CTTCAACCCC CGCGTGGTGA AGGCCTGGAT GCTCAACGAG TGGGAAGCCA CGCTGCCCCC GGCCCTGGTG CAGTCGGGCA TGCTGGACCA GCTGGCGCAC CACCTCGACC GGCTCATGGA AGACCGTGCC CTGGTTTCGC CGATTCCGAT AGACCAGCCG CTGGTGGACG AGGTGCGCCA ACGGCTGGCG CAGCTGTCGC CTGCGCAGCG GGCCTACAGC CGGCTGAAGC AGTTGCTGAC CACGGGCACG GCGCTGCCGC CGGACTTCAC GCTGGTGCGG GCCGCCGGCC CCGAGGCGCC GCAGGTGTTC ACGCGGCGCA GCGGCAAGCC GCTCACTCAG GGGATTTCTG GACTGTTCAC CTACGACGGC TACTACGGCG TGTTCTCGCA TGAGCTGCCC AAGGTGACCT CGCTGCTGGC GCAGGAGGAA ACCTGGGTGC TGGGCAAGGC GCAGGGGCAG CGCAGCGTGG CCAACGAGGT CATGACCGGG CAGCTCGCGC TCGAGGTCAA GCGCCTCTAC CTCATGGAGT ACGCCAAGGT CTGGGAGGAC TTCCTCGCCG ATGTGCGGCC CGTGCAGGTG GCGTCGCTCG ACCAGGCCGG CGAGCAGGCG CGGCTGTATT CGTCCGCCAA TTCCAGCCTG GAGCAGTTCA TCCGCGCGGT GGCCAAGGAA ACCACGCTGG GTCAGAAGCC GGGGGCCGGC GGCAGCAGCA CCAGCAGCTG GCTGGGCGAG AAGATCAACC GCATCAAGGA GGAGCAGGAG CAGCTCAGCC GCCTCACCGG CAAGCGGGTG AACATCGGCG GGCTCGCGGC CAGCACCAAC CTCGAGGCCG ATCTGGTGGA CTTCCGCTTC CGCGAATACC GCCGTCTCGC CACCTCCAAC GGATCGGGCC CGGCGCCCAT CGCCGCCAGC CTGCAGGTGC TCAACGAAGC CGCCGCGGTC ATCTCGTCCG CGCGCCAGCA GATCAGTGCC GGCGGCACCG TGCCGCCGTC GCTCTCGCCG GCCCTGGAGC GCGTGCGCAT GGAGGCCAAG CGCGTGCCGC CGCCCCTCAA CACCATGTAC GAGGATCTGG CATCGTCCAC GTCGGCCATG GTAGGCCGCG ACGTGCGTGC CACCGTGGGC AGCAACCTCA ATGCCACCAT CGGGACGTTC TGCCGCAGGG CGATCGGCGG CCGCTATCCC TTCACCAAGG GATCGGCCAG CGACGTGACG AGCGACGACT TCGCCAGCCT GTTCTCGCCG GGCGGCATGA TGGACGAGTT CTTCCGCAAC ACCCTGCAGC CGATGGTGGA CATCTCCACC ACCCCCTGGC GCTTCCGCCA GGGTGTCGAT GGGACGCCGG TCGGTGGATC GGCCGCGCTG GCCTCGTTCC AGCGCGCCGC GACCATCCGC GACGTGTATT TCCGGGCGGG CGGCAAGGTG CCGTCCATCC GCATGGACAT CAAGCCGCTG GAAATGGACG CCTCCATTTC GCAGATGGTG CTGGACATCG ACGGCGAGGT GCTGCGCTAC CAGCACGGCC CGCAGATCCC GAAATCGATG GCCTGGCCCG GCACCCGGGG CACGGGCCAG GTCCGCCTGC AGATCACCGG GGGCGGTGCC GAGAACACGG GCCTGGTGAC CGAGGGACCC TGGGCCGTGC ACCGTTTCTT CGACAAGGCC CAGATTCTGC CGGGCAGCAC GCCCGAGCGC TTCGTCGCCG CCTTCGATAT CGGCGGGCGC AAGCTGCGCT TCGAGGTCAC CACGGGCAGC GTGCTCAACC CGTTCCGTCT CAAGGCCATG GAGGAGTTCG CGTGTCCTGG CAATCTCTGA
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Protein sequence | MLRKIFSFFF NRFTLVLCGL VLLSLLVWFV GPLVYIKPYQ PLESEAVRGW IIAALFGIWF LRLFIRWWRA KEMNARLLGQ LARIGASDAS APEAGPGKEE VAELEKRFKE AVDVLGKTRF GQTEQGWFGR LSRRYLYQLP WYLIIGSPGS GKTTALVNSG LDFPLAAQFG KASIRGVGGT RNCDWWFTDQ AVLLDTAGRY TTQESDEAQD SAAWSGFLGL LRRFRGRQPI NGVLVTLSVQ ELLSGGDAER ERLARLIGLR LAELCEGLSI KFPVYVLVTK TDLLAGFNEF FGNMTREERA QVWGFTNPYV EGQAQEDPGL QFRKEFDGLA DQINRLLPQR LLAEPDLARR GQIYGLPQQF VGLRDVVQQT LSTIFASSRF KEKPLFRGVY FTSGTQEGMP FDRVLSALSR RFSVAPPAHP AGEGRAGKSY FIETLLKGVI FNEAGLTGRN AKKERQLRLL QAAGFFALAA GLAGATIAWT ISHGNNQKYL DEVAAKVPTL KQAVEESRDA DPENMVALLP LLNHAEALAV SQRYTGDSPP LSWRYGLLQV PKVQTAADAT YMRLLEDAWL PRLARHLRNS LQQASTANPE ASYEALKVYL MLYDPERFNP RVVKAWMLNE WEATLPPALV QSGMLDQLAH HLDRLMEDRA LVSPIPIDQP LVDEVRQRLA QLSPAQRAYS RLKQLLTTGT ALPPDFTLVR AAGPEAPQVF TRRSGKPLTQ GISGLFTYDG YYGVFSHELP KVTSLLAQEE TWVLGKAQGQ RSVANEVMTG QLALEVKRLY LMEYAKVWED FLADVRPVQV ASLDQAGEQA RLYSSANSSL EQFIRAVAKE TTLGQKPGAG GSSTSSWLGE KINRIKEEQE QLSRLTGKRV NIGGLAASTN LEADLVDFRF REYRRLATSN GSGPAPIAAS LQVLNEAAAV ISSARQQISA GGTVPPSLSP ALERVRMEAK RVPPPLNTMY EDLASSTSAM VGRDVRATVG SNLNATIGTF CRRAIGGRYP FTKGSASDVT SDDFASLFSP GGMMDEFFRN TLQPMVDIST TPWRFRQGVD GTPVGGSAAL ASFQRAATIR DVYFRAGGKV PSIRMDIKPL EMDASISQMV LDIDGEVLRY QHGPQIPKSM AWPGTRGTGQ VRLQITGGGA ENTGLVTEGP WAVHRFFDKA QILPGSTPER FVAAFDIGGR KLRFEVTTGS VLNPFRLKAM EEFACPGNL
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