| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1463 |
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| Symbol | |
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| ID | 4665650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1615495 |
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| End bp | 1616532 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639822666 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_969828 |
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| Protein GI | 120610150 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGCCT CGGCAGCGTC AAGCGACAAT CGCCGGGTGA CCACGCCACA TTCCACGCGC
CGCGACGCAG ACATTCCCGA GGCGGCAGCG CCTGAACCGC CTGCAGCGCC CAACCTGCCC
GCCACCCCGC CCGCCACGCG GGTACCGGAA GGCTTCCAAC CGGCGGCGTC GTCGCGCCCC
CCGGAAGGGG ATGCGGAATG GCGCGCGCAG CCCGTCACGC ATTACGAGAA TTTCCCGGTG
GCGTCCTGGC TGTGCCCACC GGCACTGCGC GAGCCGATCG CCGCGATCTA CGGCTTTGCC
CGCACGGCCG ACGACATCGC GGACGAGGGC GATGACACGC CTGCAGAGCG GCTGGAGGTA
CTGGCGGAAT ACACCACGGA ACTGCACCGC ATCGCCGCGG GCCACCCACC CGGAGCGCGG
TGGGCGGCGG TGTTCGGCCC GCTCCAGAGG GCGATCCGTG CACACGCGCT TCCCGTCCCG
CTGCTGGCGG ACCTGTTGAG CGCTTTCACC CAGGACATCG TGCGGACGTC GGCCGGCCTC
ACCTATGCGC ATCGGGATGA ACTGCTCGAC TACTGCCGGC GGTCCGCCAA CCCGGTGGGG
CGGCTGTTGC TGCACCTCTA CGGCATCGGC GATGCCCGGG CGCTGGCCCG CAGCGATGCG
ATCTGCACCG CGCTGCAGCT CATCAATTTC TGGCAGGACT TCAGCGTGGA CCTGCCCCGC
GGACGGCATT ACCTCACCGA TGCCGATCTG GCGCGCTTCG GCATCGACCG CGCGCTGCTG
CAGCGTCAGC CGATCGATCC GCGGGCGCGT GCCCTGGTGG CCGACAACGC GGCGTGGGCA
CGGGCGCTAA TGGAGGAGGG CGCCCCGCTC GTGCACCAAC TGCCCGGCCG CATCGGTTGG
GAGCTGCGCC TCGTGGTGCA GGGCGGGCTG CGCATTCTCG ACAAGGTCGA AGCCCTGCGC
GGCGACAGCC TCGTGCGCCG GCCGGTGCTG GGGGGCTTCG ACTGGCTGCG GATGGTGGCC
CGGGCCGTGG CGATGTGA
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| Protein sequence | MKASAASSDN RRVTTPHSTR RDADIPEAAA PEPPAAPNLP ATPPATRVPE GFQPAASSRP
PEGDAEWRAQ PVTHYENFPV ASWLCPPALR EPIAAIYGFA RTADDIADEG DDTPAERLEV
LAEYTTELHR IAAGHPPGAR WAAVFGPLQR AIRAHALPVP LLADLLSAFT QDIVRTSAGL
TYAHRDELLD YCRRSANPVG RLLLHLYGIG DARALARSDA ICTALQLINF WQDFSVDLPR
GRHYLTDADL ARFGIDRALL QRQPIDPRAR ALVADNAAWA RALMEEGAPL VHQLPGRIGW
ELRLVVQGGL RILDKVEALR GDSLVRRPVL GGFDWLRMVA RAVAM
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