| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1427 |
|---|
| Symbol | |
|---|
| ID | 4668965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1567729 |
|---|
| End bp | 1568886 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639822621 |
|---|
| Product | Pyrrolo-quinoline quinone |
|---|
| Protein accession | YP_969792 |
|---|
| Protein GI | 120610114 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1520] FOG: WD40-like repeat |
|---|
| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.390879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACACAGC AGCACAACTT CGAGCGCGGC GCCCGCCGCG CGGGCCTGGC CCTCATCGTG
GCGGCCGCCA CACTGGCTTC CGGGTGCTCC CTGTGGGGTG GATCTTCCAA GCCCAAGCCC
GCCGAACTGG GGCCCGTGGT TCCCGTGATC GGCGTGCGGC AGGCCTGGAC ATCCAAGATC
GGAGAGATCG GCCGCCTGCC CCTGTCCGTC CACGTCAACG GGACCCAGGT CACCGTCGCA
TCCGCTGAAG GTACCGTGGC CGCCATCGAT GCCCGCACCG GTGGGGACAT CTGGCGCGCC
ACGGTCGGCG AGCCGCTGTC CGCGGGCGTG GGCAGCGACG GCAAGTGGAC CGCGGTCGTC
ACCAGCTCCA ACCATCTGGT CGTCCTGTCC GCCGGCCGCG AACTGTGGCG CAAGCCGCTC
GCGGCGCAGG TCTACACGGC GCCGCTGGTG GCCGGCAACC GCGTTTTCGT CCTGGCGGCG
GACCGGTCGC TGTCCGCCTA CGATGCGGCG GGCGGCGCCA GGCTCTGGAA CCAGCAGCGT
CCCGGGGAAC CCCTGGTGCT GCGCCAGGAT GGCCTGATCA CCGCCGTCGG CGACACCCTG
GTCGCCGGGC TGTCGGGCCG GATGGTGGGG TTCAACCCCG ACAACGGTAC CGTGCGCTGG
GAAGCCCCGC TGGCCAGCCC GCGCGGCACC AACGACGTCG AGCGCCTGGT GGAACTGCTC
GGCCGCGTGA GCCGCGAAGG CGACAGCGTC TGCGCCCGCG CCTACCAGGC CACGGTGGGC
TGCGTGGACA CTTCCCGCGG CACGGTGGCC TGGACCCATC CCGCCAGCGG CTCCGAAGGC
ATCCATGGCG ACGCGACCAT GCTGTTCGGC ACCGAGAGCA ATGGCACCGT GGTGGCCTGG
AAGCGCGCCG ACGGCGCCCA GGCCTGGTCG CTCGACAAGC TGCGCTACCG CAAGCTGAGC
GCGCCCCTGC TGCTGGGGCG CTCGGTGGTG GTGGGCGACG ATTCGGGCCT CGTGCATCTG
CTGTCCCGCG AGGACGGCTC CTTCCTGAAC CGCCTCACGA CCGATGGCTC GGGCGTGGCC
GCTCCGCCCG TTGCTGCAGG CGACACGCTG GTGGTGGTCA CGCGCAACGG CGGCATCTAC
GGGTTCCGTC CCGAATGA
|
|---|
| Protein sequence | MTQQHNFERG ARRAGLALIV AAATLASGCS LWGGSSKPKP AELGPVVPVI GVRQAWTSKI
GEIGRLPLSV HVNGTQVTVA SAEGTVAAID ARTGGDIWRA TVGEPLSAGV GSDGKWTAVV
TSSNHLVVLS AGRELWRKPL AAQVYTAPLV AGNRVFVLAA DRSLSAYDAA GGARLWNQQR
PGEPLVLRQD GLITAVGDTL VAGLSGRMVG FNPDNGTVRW EAPLASPRGT NDVERLVELL
GRVSREGDSV CARAYQATVG CVDTSRGTVA WTHPASGSEG IHGDATMLFG TESNGTVVAW
KRADGAQAWS LDKLRYRKLS APLLLGRSVV VGDDSGLVHL LSREDGSFLN RLTTDGSGVA
APPVAAGDTL VVVTRNGGIY GFRPE
|
|---|
| |