| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1416 |
|---|
| Symbol | |
|---|
| ID | 4668258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1556350 |
|---|
| End bp | 1557249 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639822610 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_969781 |
|---|
| Protein GI | 120610103 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGTAT CGCGTGGTCT TGTGACTTGG AGTTCGGTGG CGTTGGCGGT CATGGTGCTG
GCCGGCTGCG GGACCCGCGT CAACAGGGCT CCGGTGGAAG ACCGCGGCAC CGCCGTATCC
TCCTCGTCCA CATCGCCGCA GTCCGGCGTC GTCGTCGGCA CGCCGCCGAA GCCCCTCCCG
GGGGCTGAGA ACGCCGGCAA GCCCGGCTAC TACAGCGTGA AGCCCGGCGA CACCCTCATC
CGCATCGGGC TCGAATCCGG CCAGAGCTGG AAGGACATCG CCCGCTGGAA CAACCTGGAC
AACCCCAACC TCATCGAGGT CGGCCAGGTG CTGCGCGTCG TGCCGCCCGG CACCACGCCG
CCCGCGCAGG TGGCATCCGA CACCGGCGTG GTCACGCGTC CCGTGATCTC CACGGCCATC
GTGCCCGCCC CGGCGGCATC CGGGGCGAGC GCGCCGCGCA GCGGTGCGTC CGCCGTGGCG
GCAGCGCCCG CTCCGGCACC TGCCCCAGCT CCGGCTGCCG GTGGCGGCGA TGACGACATG
GCCTTCATCT GGCCGGCATC CGGCTCGCTG GTGGCCGGCT TCGACGAGGC CCGCAACAAG
GGCTACGACA TCGCCGGCAA GGCGGGCGAC CCGGTGCTGG CCGCCGCCGA CGGCCGCGTG
GTGTATGCCG GCGCGGGCCT GCGCGGCTAC GGCAACCTGG TGATCCTCAA GCACAACAAC
ACCTACCTGA CGGCGTACGC CCACAACCAG ACGCTGCTGG TCAAGGAAGA CCAGTCGGTG
CGGCGCGGCC AGAAGATTGC CGAAATGGGC AGCTCCGACA CCGACCGCGT GAAGCTGCAC
TTCGAGATCC GCCGCCAGGG CAAGCCCGTG GACCCGGCGC GCTACCTGCC CGCGCGTTGA
|
|---|
| Protein sequence | MLVSRGLVTW SSVALAVMVL AGCGTRVNRA PVEDRGTAVS SSSTSPQSGV VVGTPPKPLP
GAENAGKPGY YSVKPGDTLI RIGLESGQSW KDIARWNNLD NPNLIEVGQV LRVVPPGTTP
PAQVASDTGV VTRPVISTAI VPAPAASGAS APRSGASAVA AAPAPAPAPA PAAGGGDDDM
AFIWPASGSL VAGFDEARNK GYDIAGKAGD PVLAAADGRV VYAGAGLRGY GNLVILKHNN
TYLTAYAHNQ TLLVKEDQSV RRGQKIAEMG SSDTDRVKLH FEIRRQGKPV DPARYLPAR
|
|---|
| |