| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1314 |
|---|
| Symbol | |
|---|
| ID | 4669228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1441201 |
|---|
| End bp | 1442211 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639822508 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_969679 |
|---|
| Protein GI | 120610001 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATT CGTTGTCGCG CAGGCGCGCG CTCCTTTTAT GTGCCTCGGC CCCGCTGGCC
GCTGCTGGCA TGGCCCCGGC GCATGCGCTG GCGCAGGGCT CCGTGGCGGA CTGGCCGGGC
TCCCGTCCCA TCCGCATCAT CGTGGCCTAT CCGGCCGGCG GTGTGAGCGA CGTCATGGCG
CGGGCAATCG GAGACCGGCT CGCGGCGCAA CTGGGCACGC CCGTCATCGT GGACAACAAG
GCAGGGGCGG GCGGCGCCAT CGCCATGGAT GCGGTCGCCA AGGCCCCGGC GGACGGCCAT
ACGCTGGGCT TTTCGTCGAT CAGTCCGCTG GTGCTGAGTC CGCACCTGGG CCGGTTGCCG
TTCGACCCCG TGCGCGACAT CGCCCCCGTG GCCAGCGTGA TGGTGTCGCC GGTGCTGCTG
CTGGCCACGG CCGCTTGCAC CGCCCGGGAT TTCCCCGCAT TGGTCGCACA GGCCAAGGCC
CGGCCGGGGG AGGTACGCTG GGCGACTTCG GGGCAGGCGT CCTTGGGGCA CATCATGCTC
GAGCAGATCA TGCAGGCCTC GGGCGCGAAG ATCACGCACG TTCCCTACAA GGGCGGCGGC
CAGCAGCTCA ACGATGCGTT GAGCGGCCAG TTCGAGATTC TCTCCACCAA CGCGGGGCCG
GCGGTCGCCC AGCACATCCA GGGCGGCAAG CTGCGCGCTC TCGCCGTGGG GGCCCCGCAG
CGAGTGGATG GCCTGCCGGG CATACCCACC CTGGCCGAGC TCGGGATGCC GGCGGCCAAC
CTGAGTTCGC AGTTCGGCAT CTTCGCGCCG GGCAAGACAC CGGCAGTGAT CCTGGAGCGG
CTCAACGCCG AGATCAACAA GGCCCTGGCA TGGCCGGAAC TGCGCGCGAA GCTGGTGTCC
ACGGGCAATG TGCCGATGGG CGGCGCGTCC GCGGATTTCG CGCGGGAGAT CGCCCGGGAG
TCCCAGGGCA ATGCCGCCAT CATCCGCGCG GCCCGCATCC AGCTCGACTG A
|
|---|
| Protein sequence | MIDSLSRRRA LLLCASAPLA AAGMAPAHAL AQGSVADWPG SRPIRIIVAY PAGGVSDVMA
RAIGDRLAAQ LGTPVIVDNK AGAGGAIAMD AVAKAPADGH TLGFSSISPL VLSPHLGRLP
FDPVRDIAPV ASVMVSPVLL LATAACTARD FPALVAQAKA RPGEVRWATS GQASLGHIML
EQIMQASGAK ITHVPYKGGG QQLNDALSGQ FEILSTNAGP AVAQHIQGGK LRALAVGAPQ
RVDGLPGIPT LAELGMPAAN LSSQFGIFAP GKTPAVILER LNAEINKALA WPELRAKLVS
TGNVPMGGAS ADFAREIARE SQGNAAIIRA ARIQLD
|
|---|
| |