Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1058 |
Symbol | |
ID | 4669591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1160241 |
End bp | 1161569 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639822257 |
Product | major facilitator superfamily transporter |
Protein accession | YP_969429 |
Protein GI | 120609751 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.861696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCT CTTCTTCCGC TGCCGCGAGC GCCGACGCCG CGCAGCCCCA TCGCCCGCTC ACGCGCAGCG ACTACAAGAC CCTGGGCCTT TCCGCGCTGG GCGGCACGCT CGAGTTCTAC GATTTCGTCA TCTACGTGTT CTTCGCCACG GTGGTGAGCG GCCTGTTCTT CCCGGCCGAC ATGCCCGACT GGCTGCGCCA GCTGCAGACG TTCGGCATCT TCGCGGCGGG CTACCTGGCC CGGCCGATCG GCGGCATCGT GATCGCCCAC TTCGGCGACA AGCTGGGCCG CAAGCGCATG TTCAGCCTGT CGATCTTCCT GATGGCGGTG CCGACGCTGG TGATCGGCCT GCTGCCCACC TACGCGAGCA TCGGCGTGGC GGCGCCGCTG CTGCTGCTGG CGATGCGCGT GCTGCAGGGC GCGGCCATCG GCGGCGAGAT GCCCGGGGCC TGGGTGTTCG TGGCCGAACA CGTGCCGAAG AACCGCTACG GCCTGGGCGT GGGCACGCTG ACGGCCGGCA TCACGGGCGG CATCCTGCTG GGCTCGCTGG TGGCGATCGC CATCAACCGC ACGTACACGC CCGCCGAGGT GCAGGGCTTC GCCTGGCGCA TTCCGTTCAT CCTCGGCGGC GTGTTCGGCC TGGTGTCGGT GTACCTGCGC CGCTTCCTGC ACGAGACGCC GGTGTTCCAG GAGCTGGCCG CGCGCCGCGC CGTGGCGCGC GAATTGCCGC TCAAGACCAT CTTCCGCGAC CACAAGGGCG CGATGCTGCT GGTGGCGCTG ATGACCTGGG TGCTCTCCAC CGCCGTGGTG GTGGTGGTGC TGATCACGCC GTCGTACCTG CAGAAGGTGT TCCACCTGCC CGCCACGCTG GCCCTGGAGG CCAACGCCGT GGCCACGCTC ACGCTGACCA TCGGCTGCGT GGTGATGGGC TGGGCCACCG ACCGCTTCGG CACCCGCGCA GTGATGCTGG CGGGCTGGGG CGGCCTGTTC CTGACCTCGT ACCTGTTCTA CCTGGGCCTG CCCGGCACGC CGGAGACGCT GGTGCGCAAC TATGCGCTGG TGGGCTTTTT CGTGGGCTCG ATCGCGCTGC TGCCGATCGT GGGCGTGCGC GCCTTCCCGC CGGACGTGCG CTTCTCGGGC CTTTCGTTCT CCTACAACAT GGCCTATGCG GTGTTCGGCG GCATCACGCC GGTGCTGCTG ACGGTGTGGA TGCAGCGCGA CCCGATGGCG CCCGCGCACT ACGTGGCGGC CATGGGGCTG CTGGGCTTCG TGCTGGGCTT CGTACCGCTG GCCTCGCGCG GCTGGCAGCC TGCGCCCGCG CGGGCCTGA
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Protein sequence | MTSSSSAAAS ADAAQPHRPL TRSDYKTLGL SALGGTLEFY DFVIYVFFAT VVSGLFFPAD MPDWLRQLQT FGIFAAGYLA RPIGGIVIAH FGDKLGRKRM FSLSIFLMAV PTLVIGLLPT YASIGVAAPL LLLAMRVLQG AAIGGEMPGA WVFVAEHVPK NRYGLGVGTL TAGITGGILL GSLVAIAINR TYTPAEVQGF AWRIPFILGG VFGLVSVYLR RFLHETPVFQ ELAARRAVAR ELPLKTIFRD HKGAMLLVAL MTWVLSTAVV VVVLITPSYL QKVFHLPATL ALEANAVATL TLTIGCVVMG WATDRFGTRA VMLAGWGGLF LTSYLFYLGL PGTPETLVRN YALVGFFVGS IALLPIVGVR AFPPDVRFSG LSFSYNMAYA VFGGITPVLL TVWMQRDPMA PAHYVAAMGL LGFVLGFVPL ASRGWQPAPA RA
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