| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1038 |
|---|
| Symbol | |
|---|
| ID | 4669667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1136996 |
|---|
| End bp | 1138534 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639822237 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_969409 |
|---|
| Protein GI | 120609731 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.475069 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG TCCGCCCCCA GGCCCAGGAA GCCGACATCG CACTGCTGCT CGAAGGCACG
TTCCCCTACG TGAGCGGGGG CGTGTCGAGC TGGATCAACC AGATCATCCG CGCCTACCCC
GAATACCGGT TCGCCATCAT CTTCCTGGGC AGCCGCCGCG AGGACTATTC CGGCTTCAAG
TACGAACTGC CGTCCAACGT GGTGCATTTC GAGGAGCACT ACCTCTACGA GCACCTCGGC
GTGCGCTCCA TGCCCGCGCG GCGCCGGGGC GACCGCGCCG CGCTCGAGAT GGTGCGCACG
CTCGTCGATT CGTTCCGGCT CGGCGACCGC AGCCCCGCGG CGATCGAGGC CTTCCAGCGC
ATCAGCCTGG AGATGCAGCC CGGCGGCCGC CTGCCGCTGG AAGACTTCCT CTACAGCGAG
CGCGCCTGGG AAATCATCTG CCAGAGCTAC CGCGAGCACT GCACGGACCC GTCCTTCGTG
GACTATTTCT GGACCGTGCG CATCATGTAC CAGCCGCTCT GGATGCTCGC GCGCGTCGCC
CGCAGCATGC TGCGCGTGCG CATGGTGCAC AGTGCCTCCA CCGGCTATGC GGGCTACCTG
GGCGGCCTGG TCCGGCAGAT GCGCGGCGTG CCGCTCATCC TCTCGGAACA CGGCATCTAT
ACCAAGGAAC GCAAGATCGA CCTGTTCAAG AGCGAGTGGA TCCGCGACAA CCGCAACATC
TTCCAGCGCG ACCCGACCGA GCTGTCCTAC TTCCGCCAGA TGTGGATCCA GTTCTTCGAG
TGGCTGGGCT ACTACTGCTA CGCGGCGGCC GACCCGATCA TCGCGCTCTA CGAGGCCAAC
CGGCTGCGGC AGGTGGCCGA CGGCGCGGAT CCCGCGCGCA CCTTCAACAT CCCCAACGGC
ATCAAGCTCG GCCGCTTCGC GCCGCTGCGC GGCCAGCGAC CCGCCGAGGT GCCGCCCATC
CTCTGCCTCA TCGGCCGGGT GGTCCCCATC AAGGACATCA AGACCTTCAT CCGCGCGATG
CGGCGCGTGG TGAACCAGCG GCCCGACGCC GAAGGCTGGA TCGCCGGCCC CACCGAGGAG
GACCCGGCCT ACGCGCAGGA GTGCGAGAAC CTCGTGCGCA GCCTGGGCCT GGAGAACAAC
GTGCGTTTCC TGGGCTTCCA GAAGGTGGAA GACCTCATGC CGCGCATCGG GCTGATCATC
CTCTCGTCCA TCAGCGAGGC GCTGCCCCTG GTGCTGCTGG AAGGCTATGC GGCCGGCGTG
CCGGCCGTCT CCACCGACGT GGGCTCGTGC CGCCAGCTCA TCGAGGGGCT GGACGAGGAA
GACCGCGCGC TCGGCGCCTC CGGCAAGGTC GTGCCCATCG CAGATCCCCA GCAGCTCGCG
GACGCGTCGC TGTCGCTGCT CAACGATGCG CCCGCCTGGC ACGCGGCCAG CCGCGCCGCC
GTGGCGCGCG TGGAGCGCTA CTACACCGAT ACGCTGATGT TCGACCGCTA CCGCCGCGTG
TACGAACGGG CGTTCGAACA GACGGAGGGC CCCCGCTGA
|
|---|
| Protein sequence | MSDVRPQAQE ADIALLLEGT FPYVSGGVSS WINQIIRAYP EYRFAIIFLG SRREDYSGFK
YELPSNVVHF EEHYLYEHLG VRSMPARRRG DRAALEMVRT LVDSFRLGDR SPAAIEAFQR
ISLEMQPGGR LPLEDFLYSE RAWEIICQSY REHCTDPSFV DYFWTVRIMY QPLWMLARVA
RSMLRVRMVH SASTGYAGYL GGLVRQMRGV PLILSEHGIY TKERKIDLFK SEWIRDNRNI
FQRDPTELSY FRQMWIQFFE WLGYYCYAAA DPIIALYEAN RLRQVADGAD PARTFNIPNG
IKLGRFAPLR GQRPAEVPPI LCLIGRVVPI KDIKTFIRAM RRVVNQRPDA EGWIAGPTEE
DPAYAQECEN LVRSLGLENN VRFLGFQKVE DLMPRIGLII LSSISEALPL VLLEGYAAGV
PAVSTDVGSC RQLIEGLDEE DRALGASGKV VPIADPQQLA DASLSLLNDA PAWHAASRAA
VARVERYYTD TLMFDRYRRV YERAFEQTEG PR
|
|---|
| |