Gene Aave_1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1012 
Symbol 
ID4667860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1114003 
End bp1114797 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content70% 
IMG OID639822212 
ProductABC transporter-related protein 
Protein accessionYP_969384 
Protein GI120609706 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCA TGACGCCTGA TCTCTCTGCC GCCGCCGTGC CCATGATCGA GGCGCGGGGC 
CTGCACAAGG CCTTCGGCGG CCTGCCGGTG CTGCGGGACG TGTCGCTCAC GCTCGGCCGC
GGCGAGACCG TGGCCGTGAT CGGCCCCTCG GGCTCGGGCA AGAGCACCTT CCTGCGCTGC
CTGAACCACC TGGAAACCAT CGACCGCGGC CACATCGCCA TCGAAGGCGA CACGCTCGCG
ACCACCGATG CCGGCGGCCA CTGCCGCTAC GTGCCCGAGG CCGAGGTGCG CCGCATCGGC
CGCCGCATGG GCATGGTGTT CCAGTCGTTC AACCTGTTCC CGCACCTCAC CGTGCTGGAG
AACGTCATCG AGGCACCCAT GGTGGTCAAG CGCGTGGCCC GGCAGGCCGC CGTGCCGCCC
GCGCAGGCGC TGCTCGCCAA GGTGGGGCTG CTGGAGAAGC AGGACAGCTA TCCCGGCCGG
CTTTCGGGCG GGCAGAAGCA GCGCGTGGCC ATCGCCCGCG CGCTGGCCAT GGAGCCGGAC
ATCCTGCTCT TCGACGAGCC CACCTCCGCG CTCGATCCGG AACTGACCGG CGAGGTGCTG
CGCACCATGC GCGCGCTGGC CCAGGAGCGC ATGACCATGC TGGTGGTCAC GCACGAGATG
GGCTTCGCGC GCGAGGTGGC CCACCGCGTG GTCTTCATGG ACCAGGGTGA GATCATCGAG
GCCGCGCCGT CGGCGGAGTT CTTTGCGAAT CCGCGACATG CGCGAACCCA GGCATTCCTT
CGCAGCATGC TGTGA
 
Protein sequence
MPAMTPDLSA AAVPMIEARG LHKAFGGLPV LRDVSLTLGR GETVAVIGPS GSGKSTFLRC 
LNHLETIDRG HIAIEGDTLA TTDAGGHCRY VPEAEVRRIG RRMGMVFQSF NLFPHLTVLE
NVIEAPMVVK RVARQAAVPP AQALLAKVGL LEKQDSYPGR LSGGQKQRVA IARALAMEPD
ILLFDEPTSA LDPELTGEVL RTMRALAQER MTMLVVTHEM GFAREVAHRV VFMDQGEIIE
AAPSAEFFAN PRHARTQAFL RSML