Gene Aave_0911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0911 
Symbol 
ID4666786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp992431 
End bp993726 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content73% 
IMG OID639822111 
Productdihydroorotase 
Protein accessionYP_969283 
Protein GI120609605 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR00857] dihydroorotase, multifunctional complex type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.480107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAC TGATCCAGAA CGGCCGGGTG ATCGATCCGG CGAGCGGGTT CGACAAGACC 
GTCGATGTGG CCATCGCCGC GGGGCGGGTG ATCGCGGTCG GCCGCGCTCC CCAGGACTTC
CATCCGGCGC GCACGATCGA CGCCACGGAC TGCATCGTGC TGCCGGGGCT GGTGGACCTC
GCCGCCCGCC TGCGCGAGCC CGGGCACGAG CACGAGGGCA TGCTGGAGTC CGAGATGGCC
GCGGCCGTGG CCGGCGGCGT CACCAGCCTC GTGTGCCCGC CCGATACCGA TCCGGTGCTC
GACGAGCCCG GCCTCGTGGA GATGCTCAAG TTCCGCGCCG AGAAGCTGCA CCGGGCGCGC
CTCTTCCCCC TGGGCGCGCT CACGCGCGGA CTGGCCGGCG AGGTGCTGAC CGAGATGGCG
GAACTCACCG AATCCGGCTG CGTGGGTTTC GGCCAGGCCG ACGTGGCGCT CGCCAGCACC
CAGGTGCTGC AGCGCGCGCT GCAGTATGCC GCCACCTACG GCTACACGGT CTGGCTGCGG
CCGCAGGAGC TCCACCTGGG CAAGGGCGTG GCCGCCAGCG GCCCGCTCGC GACACGGCTG
GGCCTGTCGG GCATTCCCGT GGCGGCCGAG ACCATCGCGC TGCACACCAT CTTCGAACTG
CTCAAGCCCA TCGGCGCGCG CGTCCACCTG TGCCGGCTCT CCAGCGCGGC GGGCGTGCAA
CTGGTGCGGC AGGCGAAGGC CGAGGGCCTG CAGGTCACCT GCGATGTGAG CATCAACTCG
CTGCTGCTCA CCGACACCGA TATCGGCTAT TTCGACAGCC GCGCCCGCCT GTCGCCGCCG
CTGCGCCAGC AGCGCGACCG CGACGCCCTG CTGGCCGCGC TGGCCGACGG CACCATCGAT
GCGCTCGTGT CCGACCACAC GCCGGTGGAC GAGGACGCCA AGACGCTGCC CTTCGCCGAA
TCCGAGCCCG GCGCCACCGG CCTGGAACTG CTGGCGAGCA TCGCGCTCAA GTGGTCCCGC
GACCATGGCG TGCCGCTGGA CCGGGCGTTC GCCACGGTGA CCTCCGCGCC TGCGCGCGTG
CTGGGTTCCG CGCTCGGCAC CTTCGCCGCC AGCGCCGGCC GGCTCGTGGA GGGCGGCGTG
GCCGACCTCT GCGTGTTCGA TCCCCAGGCC GCCTGGACCG TGGAGCCCGG GGCACTGCGC
AGCCAGGGGC GGCACACGCC GTTCTCCGGC TACGAGCTGC CGGGCCGCGT GCGCTGGACG
CTGGTGGGCG GCATCGTCGC GTTCGAGCGC GTCTGA
 
Protein sequence
MKILIQNGRV IDPASGFDKT VDVAIAAGRV IAVGRAPQDF HPARTIDATD CIVLPGLVDL 
AARLREPGHE HEGMLESEMA AAVAGGVTSL VCPPDTDPVL DEPGLVEMLK FRAEKLHRAR
LFPLGALTRG LAGEVLTEMA ELTESGCVGF GQADVALAST QVLQRALQYA ATYGYTVWLR
PQELHLGKGV AASGPLATRL GLSGIPVAAE TIALHTIFEL LKPIGARVHL CRLSSAAGVQ
LVRQAKAEGL QVTCDVSINS LLLTDTDIGY FDSRARLSPP LRQQRDRDAL LAALADGTID
ALVSDHTPVD EDAKTLPFAE SEPGATGLEL LASIALKWSR DHGVPLDRAF ATVTSAPARV
LGSALGTFAA SAGRLVEGGV ADLCVFDPQA AWTVEPGALR SQGRHTPFSG YELPGRVRWT
LVGGIVAFER V