Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0756 |
Symbol | |
ID | 4666200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 811017 |
End bp | 811976 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639821955 |
Product | LysR family transcriptional regulator |
Protein accession | YP_969128 |
Protein GI | 120609450 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.898459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.852403 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGGCA AACCCTTATC CATCGCCACC GCCTGCAGCC GCCTGCGCTC GCGGCACCTG CAGTTCCTGG ACATCCTGGG GAGGACGCGC AACCTGCGGC TCACGGCCGA GCAGATGCAC GTGACGCAGC CGGCCGCCAC CAAGATCCTG CTGGACCTGG AGGAGATCTT CGATGCGCGC CTGTTCGAGC GGCTGCCGCG CGAGATGCGC CCCACCGAGC TGGGCCTGTT CGCGCTGGGC TATGCCGCCT CCGCGCTGGC GGGCCAGGCG AAGTTCGTGG ACGAATTCAA TGCGCTCAAG CAGGGCGGGC ACGGGCAACT GTCCATCGGC GCCATCTCCG GCTCGGCCGC GCGGCTGCTC ACCACGGCCA TCGCCGAGAT GCAGCGGCGC CGGCCGCTGC TGGTGCTGAA GGTGCGCGAG CAGAGCAGCG ACCAGCTCAT CGCCTGGCTG GGCGAGCGCA GGATCGACCT GATGATCGGC CGCTTCACCG ACGAGGCGCA GCAGGCGGAT TTCCAGTACG AGCGCCTGTC CGGCGAGACG CTGCAGGTGG TGGGCGGGCC GCACCATCCG CTGCGCGGCA TCCAGGGGCT GGAGGTGGGC CGCCTCGCGC ACTGGCCCTG GCTGCTGTAC CCGGAATCGA CGGCGCTGCG CAAGGTGTCC GACGACATCT TCCGGGCCAT CGGCATGACG CCGACCTCGG GCGTGATGGA GACGCAGTCC TTCCTGTTCG CGCTGGAATC GCTGCGCATC ACCGACATGC TCTCGCTGCA GCCGAGCGCG CTGGCCGACC GGTACATCGC CAAGGGCCTG CTCGCCCCCA TCCACGTGGA CGTGCCCCGG GCGATGCCCG ACTACGGCAT GCTGGTGCGC CAGGGCGAGA CACCGACGCC GGCGGCGCAG GCGTTCATGG AGGTGCTGCG GGATGTGGCG GGCGGGAAGG TGGTGGCGGC CCGGCGGTAG
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Protein sequence | MPGKPLSIAT ACSRLRSRHL QFLDILGRTR NLRLTAEQMH VTQPAATKIL LDLEEIFDAR LFERLPREMR PTELGLFALG YAASALAGQA KFVDEFNALK QGGHGQLSIG AISGSAARLL TTAIAEMQRR RPLLVLKVRE QSSDQLIAWL GERRIDLMIG RFTDEAQQAD FQYERLSGET LQVVGGPHHP LRGIQGLEVG RLAHWPWLLY PESTALRKVS DDIFRAIGMT PTSGVMETQS FLFALESLRI TDMLSLQPSA LADRYIAKGL LAPIHVDVPR AMPDYGMLVR QGETPTPAAQ AFMEVLRDVA GGKVVAARR
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