Gene Aave_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0704 
Symbol 
ID4667034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp762900 
End bp763748 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content60% 
IMG OID639821906 
Productintegral membrane protein 
Protein accessionYP_969079 
Protein GI120609401 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.64582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCGGCT TTGGAATGGC CCAAGCCGAA GTCGCCGTCA ACGTGTTGGG TGCGCATGTG 
GAACGTGGTC TGGGGCGACC CGTGCTGACG CTGGTGCACG GCTGCTTCAG CCTGGGTACG
ACGCTCGGTG CCGTGTTCGG CCTGCTACTG GTTGCACAAG GCTTGACCGT CACCTCGCAC
ATGGTCGTAG TCTGTGCGCT GCTGAGTCCG ATGCTGGTCT ATGTCACCTA CGGTGTGGTC
GGGTCACACG GCGCACGCGC AACTGATTCC GGGAATAAGC AAGGCTTCAT CGCCACCATC
AAGGACGATC CAAAGCTCAT CCTCATCGGT GCGATTGTGC TGGCGGTGGC GCTGGCCGAA
GGCTCCGCCA ACGACTGGCT ACCGTTGCTG ATTGTGGACG CGCACGAAAC CTCCGAAGCC
ATTGGTTCGC TTCTATTCGT CGCTTTCGCT GCGACGATGA CCTTGGGACG GTTCTTGGGA
ACAGGTGTGT TGCGCCGTTT CGGCCCCGTA AACGTAATTC GCGCTAGTGC GCTTATCGGC
GCAGTTGGAA TACTTATCGT CGTGGTGGCG CCGACCTTGT CAGTGGCAGG TATCGGAGTA
TTCCTTTGGG GAATCGGTGC ATCACTGGGA TTTCCTGTAG CAATGTCAGC CGGGGCCTCC
GTTGGCCACG ATCCATCCGC GCGCATCGCA GTCTTGGCCA CGATCGGCTA CACGGCCTTT
CTTGTCGGCC CTCCGCTACT CGGCTTCATT GGCGAGCACA TCGGCCTTCG GCTCACGATG
CTCGTCGTTC TAACGCTGTT GGCTCTGCCC TTGCTGTTGG CTCCTACCCT GCAGAGACAG
AAGGCATAA
 
Protein sequence
MVGFGMAQAE VAVNVLGAHV ERGLGRPVLT LVHGCFSLGT TLGAVFGLLL VAQGLTVTSH 
MVVVCALLSP MLVYVTYGVV GSHGARATDS GNKQGFIATI KDDPKLILIG AIVLAVALAE
GSANDWLPLL IVDAHETSEA IGSLLFVAFA ATMTLGRFLG TGVLRRFGPV NVIRASALIG
AVGILIVVVA PTLSVAGIGV FLWGIGASLG FPVAMSAGAS VGHDPSARIA VLATIGYTAF
LVGPPLLGFI GEHIGLRLTM LVVLTLLALP LLLAPTLQRQ KA