| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0655 |
|---|
| Symbol | |
|---|
| ID | 4667954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 707980 |
|---|
| End bp | 709263 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 639821859 |
|---|
| Product | major facilitator superfamily transporter |
|---|
| Protein accession | YP_969032 |
|---|
| Protein GI | 120609354 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.597769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCG CCCCCACCCC TGCGCGCCGC CCCACCTGGC TGCTGCAGGC GCTGTTCGGC
TGGCTGCACC TGGCATTGAC CGCGCCCAGC GTCTATCTGT GGCTGGGCCT GCCGCTGGTC
ATGCGCCAGC ACGGCTGGTC GGGCACGGCC ATCGGTCTGT TCCAGCTCGC GGGCCTGCCC
GCGCTGGCCA AGTTCGCGCT GGCCGCGCCC GTGGAGGCGC GCGACGCCCG GGGCCGGTCG
CGCTACCGCA CCTGGGCGCT GGCCCTGGGC CTGGCCTATG CCGTGGTGCT GCTGGCCCTC
GGCTGGCAGC AGTTGCTGGC CGAGCGGCTC TGGCTGTTCG GCCTGGCCTT CGCCGCCGCG
CTGGCCGCGA CCTGGGCAGA CGTTCCCGTC AGCGCGCTGG CCATCCGCCT TCTGCCTCCC
GAGGAGCGCA TGCGCGCCGG CGGCGTGCGG GCGGCGGCGC TGTCGCTGGG CGCCATCGTC
GGCGGCGGGG CCATGCTGCT CGTGCAGGCG CGCTGGGGCT GGCGGGCGCC GTTCCTGTGC
CTGGCAGGCG CGCTGGCACT GGGCGCCCTG CTGCTGGCCT GGGTGGTGCG CCGGGAGCCC
GATGAGGCGC CCGGCCCTCC GCAACGGTCC GCGCCCACCG GACTGGCGGC ACAGGTACGC
GGCTATGGCG CCCAGCCCGG CGCCTGGCAC TGGACGCTGG TGCTGGTCAG CTACTTTCCC
TTCATCGGCA CGGCCTGGTT CTATCTCAAG CCCCTGATGC TCGACCACGG CTTCGCCCCC
GCGCAGGCCG CCTGGCTGGC CGGCCTGGGC GGCGGGGTGG TGGCCGCGGT ATCCGCCGCG
GCATCTCCGC TGCTCACCCG GCGCCTGGGC ACGGCGCGCG CCCTGCCGCT CTACGCGGGG
CTCAACGCGG CTGCGCTGGC CCTTCTGGCC GCCGTGGTGG CGGCCGGCGC GCCCACGGCC
GGCATGGCCG CGGCCGTGCT GGCGGTGGCC ACGGCCATGG GGATGTCTTC GGCCTGCGTG
TTCGGCTTCA TGATGCAGTT CGCCCGGCCA CGCTCACAGG CCTTCGATTA CGGACTGCAG
GCCAGCCTGT TCGCGGCCAG CCGCATGCTC GTGCCCCTGG CCGCGGGCGT GGCGCTCGAC
GCCGCGGGCG CGGCCGCCAT GCTCGCGGGC CTGGCGCTGG CCGCCGGCCT GGCCTGGTGG
TGGGCGCGGC GCTGTGCGGC GCACGCATGG GCCGAAGGCG CCTGCGCGCC GCCCGCCTAC
TCGCGCTGGC GTTCCGACGC GTAA
|
|---|
| Protein sequence | MNTAPTPARR PTWLLQALFG WLHLALTAPS VYLWLGLPLV MRQHGWSGTA IGLFQLAGLP
ALAKFALAAP VEARDARGRS RYRTWALALG LAYAVVLLAL GWQQLLAERL WLFGLAFAAA
LAATWADVPV SALAIRLLPP EERMRAGGVR AAALSLGAIV GGGAMLLVQA RWGWRAPFLC
LAGALALGAL LLAWVVRREP DEAPGPPQRS APTGLAAQVR GYGAQPGAWH WTLVLVSYFP
FIGTAWFYLK PLMLDHGFAP AQAAWLAGLG GGVVAAVSAA ASPLLTRRLG TARALPLYAG
LNAAALALLA AVVAAGAPTA GMAAAVLAVA TAMGMSSACV FGFMMQFARP RSQAFDYGLQ
ASLFAASRML VPLAAGVALD AAGAAAMLAG LALAAGLAWW WARRCAAHAW AEGACAPPAY
SRWRSDA
|
|---|
| |