Gene Aave_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0501 
Symbol 
ID4667006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp545268 
End bp545978 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content70% 
IMG OID639821707 
Producthypothetical protein 
Protein accessionYP_968881 
Protein GI120609203 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCCA CCATCACCCG ACTTCTGCGC TGGCGCACAG CGCTCTCCTA CATCGAGTGG 
CCCATCGCCG CCGCGGCCAT TCTGCTGGCC GCTGCGCTCG CGATCGCCAT CTGGCCGGAA
CATCCGCAGG TACCGTCCTC CGAACCTCAG CCAGCCCAGC CTGCGCCGCC CATGCCCCCA
GGGCCGCCCT GGACGCACGG CCGATCGGAT GCGCGCTTCA CTATCACCAT CTATGCCGAC
CTGGAATGCC CGTACTGCCG GGACTACGTT CCCCAGCTCG TGCGCTGGGT CGCAGCAACG
CCCGACGTCA GCCTGCAGTG GCATCACCTC CCGCTCCAGG CGCATGAGCC GGCGGCCAGC
CAGGAGGCCC GGCTCGCCGA ATGTGCCGGC AACGAGCGCG GCCATGCAGG CTTCTGGCAC
ACGGTGGACT GGATCTACGC ACACACGAGC GCCGAGGGCC GCGGCGTGCC GGACGGCACA
AGCTACCCGG ACATGACGCC CCAGATGCAG GCCTGCGTGA GCAGCGAAGA ATCGAAGACC
ACCGTCAGCC GTCAAGCACA GCAGGCGGCT GCCGACGGCA TCACCGGGAC GCCGACGCTG
CGGCTGCGGG ACCGCACCAG CGGCAAGGAA ATGCACCTCA GCGGGGCGGT GCCGGCAGAT
GCCCTGATGT CCGCGCTGGA CTTGCTGGCA TCGCCGGTGC CGGGGCGCTG A
 
Protein sequence
MRPTITRLLR WRTALSYIEW PIAAAAILLA AALAIAIWPE HPQVPSSEPQ PAQPAPPMPP 
GPPWTHGRSD ARFTITIYAD LECPYCRDYV PQLVRWVAAT PDVSLQWHHL PLQAHEPAAS
QEARLAECAG NERGHAGFWH TVDWIYAHTS AEGRGVPDGT SYPDMTPQMQ ACVSSEESKT
TVSRQAQQAA ADGITGTPTL RLRDRTSGKE MHLSGAVPAD ALMSALDLLA SPVPGR