| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0499 |
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| Symbol | |
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| ID | 4666997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 538874 |
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| End bp | 543688 |
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| Gene Length | 4815 bp |
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| Protein Length | 1604 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639821705 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_968879 |
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| Protein GI | 120609201 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGG CCGCCCGACT GCACGATCCG ATCGCCCATA CCTATGCACG CGAAGGGCAT
GCGGCGGGGG CCGCCACAGC GGTCGCGCTC GAGTTCGGCA CGGCCGTCGC TATCGGGGCC
GCGGTCGGAT CAATCGCGTG CCCGGGTCTC GGCACGCTCG CGGGCATCGC CATCGGCATC
GGCGTTGCGC TGGTTTCGTT CGCCATCGCG CACGTCGCGA GTCTTTATGG TGATTTCGCG
CAATCCTTTG GCGAGGCCTT CGGGCGAAGT TTCACTTCTG ATTGTGGCGA GCTCAAGGCG
ACCGGATCGA GCACGGTCTT CATCAACGGC AAGCCAGCGA TTCGCACGGG CCTGGATGTG
GCCGAGTGCG ACAAGCACAA GATGCCGCCC AGTCTGGTGA TCTACGGCAG CGAGAACGTC
TTCATCGACA GCTACCGCGC CGCTCGCGAA GGCGACCGTG TGGACTGCGA GGCCAAAATC
AGCAAGGGCT CGGAGGATGT CTTCATCGGT GGCGAGTCCG TGCCCATCGC GGAGTTCCGC
GTGAACGAAG TACCGGAGTC CGACCGCGAG TTCGCCAGAA AGGCCCGCTT TTGGGCAGGC
ATTCTCGGCG GCGGCGTCAG CGCACTGAAG GCTGGCGTCA AGTGTTTCGG GATGGCCGTG
CTCACCGGCG TGGTGGGTGC GAAGGTGATG GGAGAGATCA TGCCGTCGTT CGATGGCGGG
CACTCCGCGG CAACGGCCTT GGGCGACGGG ATGGGCACGG CCGTCGGCAA TCTCCTGCAA
GGCAAGCCGG TACACGTGGT GACCGGCGCC AAGGTGCTGC TGGGTGACGA CGACACCGAC
TTCAGCCTGC CCGGGGCACT GCCCATCGTC TGGCGCCGCA CTTATGCGTC CTGCGATGCG
CGCACGGGCG CGCTGGGCAC TGGCTGGAGC CTGCCTTTCA GCGTGGAACT GGTCTTCGAG
GGCGGCAAGG CGCACTTCAT CGATGAGGCC GGCCGCGACA TCCCCTTCGA CGACCTGCCG
CCCGGCGGCC AGATGTTCAG CGTGCCGGAA GGCGTGCAAC TGAGCCGCGG GGAGGGCGGC
GCCTACTTCA TCGGCATGCC TGCGCTGGGC TGGATCTACT GCTTCGGCCA GCGCGCCGGC
AGCAGCGATG GCGAACGCCT CGGGTTGCAG CAATGGGCGG ATTTCAACGG CAACACCATC
GACTTCCATC GCGATGCCGA TGGCGTGGTG CGGCATGTGA CCGACAGCGC AGGCCACCGG
CTCGCGCTGC GCTATGCGCA GGCCGGCGGG CTGCGCCTCG TGCGCGTGGA CCTCACGGCG
GGCGGCCCGG CCGGCACGCT GGTCGAATAC CGCTACGACA CCCGCGGCCA GCTTGCCCAG
GTCATCGACC GCCTGGGCCG CTGCGTGCGG CGCTTCACCT GGGAGGGGGC CACCCTCGTC
GCGCAAACCT TCGCGAGCGG GCTGGTGGCC CGCTACCGGT GGGACGGGCC CGCGCCCCAA
GGCCGCGTGG TGCAGCACTG GCTGGAGGAT GCGGCCCCGG GCATGCCCGC CACCGCCTGG
ACCTTCGAAT ACGACCTGCC CGGCGAACGG CCCGGCGATC GGCGCACGCG CGTCACGGAC
CACCTCGGAA GGGTGCAACT CTTCGACCAC GATGCGGACC AGAACGTCAC GCGCATCGAG
GATCCGCTGG GGCAGGTGCA GCGCATGGAG TGGAACGACC TGTGGCAACT GCTGGCCTGG
ACGCGCGCGG ACGGCAGCCG GTTCACCTTC ACCTATGACC GCCTGGGCAA CCTGAACGGC
GCCACCGACC CGTTGGGGCA GACCGCCCGG CTGGACTGGC ACGAACGCCT GCAGCGCGTG
CGCGCGGCCA CCGCCGTGGA CGGAACCCGC TGGCACTACA CCTATGACGA CCGCGGCAAC
CGCACGGAAG TGCTGGGGCC GCCGCTGAAG CCTGGTACGC CGCCGCATAT TCCAAGTGAT
GGGGACGAGG TTCGCTGGCG TGAATCCACG CTGCACGATC CCCGTGGCCT GCCGGTGGTC
ACCATCGACG CGAACGGTGG ACGCCAGCAA TGGACCTGGG ATGAACGCGC CCTGCTGGTG
CGCCACACCG ACTGCTCGGG CAAGACCACG CGCTTCGAGT ACGACGGCAA TGGGTTCTTG
AGCAAGCACA TCGATGCGCT GGGGCAGATC ACCCACTACG TGCATGATGC GTTGGGACGC
CTGTTGAGCG TGACGCGGGC GGACGGAACA GCGGAACGAT ACACCTACGA CGGCGCAGAC
CAGCTAGTTT CGGCGGGCGA TTCGAGCAAC CGGCTCACGC ACTACCGCTA TGACATCCAC
GGCAAGCTGC TGGCACTGCA ACGCCCCGAC GGCAGCACGG TCCACCTGGG CTATGACGCA
GCGCACCGCC TCGCAAGCCT CGTCAGCGAG AACGGTGCCA ACTACCGCTT TGCCTACGAC
ACCGCCAACC GGCTGGTCCA GGAACAGCGG CCGGACGGTA GCCGTCACAC CTTCTCTCAC
GATTCGCTGG GACGAGTGGT GGAACTGCGG GAAGACCCCG GCGAGGACGA CGTCGTTGGG
CAGGCAATCC GGGGGCATGC GCCGGCAGCG CCGATCCGCA CCACCTGCGA GCGTGACGGC
ATCGGGCGGC TGATCGCGAA GCGCGTGCAG GCCATGACGG GGGCACCGTC TTCGCAAGAC
ACCATCGAGC AGCGCTTCGC CTACGACAAG ATGAACCGGC TGGTGCGCGC GGAGACGCTC
GATGCTGCGG GACAGTCGCC CGCGCAAGTG GCGGAATTCG GCTACACCCT GCTGGGGGAT
CTGGCGCAGG AAGCAGCGGA GGACGTTGTA TCCGGCACCC GCAGCGTGAT GCGCCACACC
TGCGACCCGT TGGGCAATCG CCTTGCCACC GAACTACCGG ATGGGCGCTT GCTGCGCGAA
TTGCATTACG GCAGCGGCCA TGTCCACCAG ATCAGTTTGG ACGGCGTGGT GGTGGCCGAC
ATCGAGCGCG ACGATCTGCA CCGCGAGGTG CTGCGCACGC AGGGTCGCTG GGCGAGCCGC
TGGGCCTACG ACCCGCTGGG CCGGCAACGG GCACAGTGGA CCCAATCAGC GAGCCTGCGT
GTCGGGGGCA ACTGGGCACA ACAGATGCCG GACGCGGCGA ACGCGTCTGG ACCGGGCATG
CTAACGGATG GCCTGCGCAA GCAATGGGAC TATGACGCTG CGGGTGAGCT GGTGCGCACG
CGCCACAGCC GAAATGGGGA GACCCAGTAC CGCTATGACC CCGCTGGCCA TGTCCTATCG
GCTACGCTGC AGGCTGCCGG GGCCGCAGGC GGTCTTTCTC CGGCGTTGCA ACAGGCGCTG
CACGAAGTGT TTCATTACGA TCCCGCCGGC AATCGGCTGG ACGCGCCCGT GCCTCAAGGC
GCAGAAGGTA GCCGGGGCTG GGTGCGCCAC AACCGAGTGA AGGTGCTGCA GGACAAGCGC
TTCGACTACG ACGGCTTCGG CCGGCTGGTG CGCAAGCGCA TCGGCGGGCA CACCGAACTG
CACTGCCGTT ACGACGCGCT ACACCGCATG ATCGCCGCGT CGGTGATCCG TGCGGGCCGC
GACGGAGAGC CGATCCGGCA GGTCTTCCGC TACCGTTACG ACCCGCTCGG CCGGCGCATC
GCCAAGGAGG ACGACTTCGG CGAGACGCGA TTCGTATGGG AGGGCATGCG GCTTCTGCAG
GAGAGCCGCG GCGCGCACAA CAGCACCTAC CTGTACGAGC CGTCCAGCTA CCGGCCGCTG
GCGCGTATCG ACGGTACCGG TCCGCTGGAG CCGGAGCATC CAGTTGCAGT GCTGGCGCTC
GCAGGGGAAG ACCCGCGAGG CGACCCGGCC GCGGGCAAGG TCCGTTCGAT TCCGGTCACC
AATGGTGACG CCAGTGATGC GCGCCATGCT GTGGCTGGAC CCGTGGGGGC GACCGCACGC
TATCTGGCTG AGGTGGAAGC CCTCGAGCGC GGCGCTGGGC CAGATGAGCC CGGCCAGTCC
ACAGGGCGGG GCGGGCAGGC ACGGCAGACC CAGAGTGCAT CCACTCCTTC CGCGCGGATT
TACTACTTCC ACCTACAACC CAGCGGGTTG CCCGAGGAGA TGAGCGATCG CAATGGGCAC
CTCGTGTGGC GGGCTCAATA CCGCTTGTGG GGCAATGCGG TCGCTGAGGA GTGGCAGGCC
TTCGATGCAA CGGGCCGACC GGTGAACGCT CCGATGGCGG AGACGGGCAT CCGGGCGCAA
GTCAGCGCGT CACCCGCTCC CCAAAACCTG CGTATGCAGG GGCAGTACCT GGACCGGGAA
ACGGGGTTGC ATTACAACAC CTTCCGGTAC TACGACCCGG ACCTTGGTGC CTTCACCACG
CCGGATCCAA TCGGTTTGGC TGGCGGTCTG AACCTGCATG GGTATGCAGC AAACCCCCTG
TCCTGGATCG ATCCCTGGGG CTGGGCCTGC ATCCCGAACA AGGTGGCAGG CACCGCACGC
GAAGCGCGCG TAGGTGCTAA ATTGGACGGT AAGTTCGGCG CGTCAAATGT CTTGCGTGAA
CGATATCTTC GCGATGCAAA CGGGAAGATT GTTCGCGACC CTTTGACGGG GGAAGCGCGG
CGTGTCGACT TTGTCGTAAA GGGTTCCGAT GGCAAGGGCA CAGCGATTGA GGTCACGAGT
AAAACCGCTA ATAAGGATGC GCAGCAGCTG AAGGAGGCGC GAATTAGAGC CCAAGGCGGA
GTTTATGTGC GTGAGCCAGG ATCAAAGGTG CTGGTTGAAG TGCGCAATAC ATCTAGAGTT
GTAAGAGTGG AGTGA
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| Protein sequence | MPKAARLHDP IAHTYAREGH AAGAATAVAL EFGTAVAIGA AVGSIACPGL GTLAGIAIGI
GVALVSFAIA HVASLYGDFA QSFGEAFGRS FTSDCGELKA TGSSTVFING KPAIRTGLDV
AECDKHKMPP SLVIYGSENV FIDSYRAARE GDRVDCEAKI SKGSEDVFIG GESVPIAEFR
VNEVPESDRE FARKARFWAG ILGGGVSALK AGVKCFGMAV LTGVVGAKVM GEIMPSFDGG
HSAATALGDG MGTAVGNLLQ GKPVHVVTGA KVLLGDDDTD FSLPGALPIV WRRTYASCDA
RTGALGTGWS LPFSVELVFE GGKAHFIDEA GRDIPFDDLP PGGQMFSVPE GVQLSRGEGG
AYFIGMPALG WIYCFGQRAG SSDGERLGLQ QWADFNGNTI DFHRDADGVV RHVTDSAGHR
LALRYAQAGG LRLVRVDLTA GGPAGTLVEY RYDTRGQLAQ VIDRLGRCVR RFTWEGATLV
AQTFASGLVA RYRWDGPAPQ GRVVQHWLED AAPGMPATAW TFEYDLPGER PGDRRTRVTD
HLGRVQLFDH DADQNVTRIE DPLGQVQRME WNDLWQLLAW TRADGSRFTF TYDRLGNLNG
ATDPLGQTAR LDWHERLQRV RAATAVDGTR WHYTYDDRGN RTEVLGPPLK PGTPPHIPSD
GDEVRWREST LHDPRGLPVV TIDANGGRQQ WTWDERALLV RHTDCSGKTT RFEYDGNGFL
SKHIDALGQI THYVHDALGR LLSVTRADGT AERYTYDGAD QLVSAGDSSN RLTHYRYDIH
GKLLALQRPD GSTVHLGYDA AHRLASLVSE NGANYRFAYD TANRLVQEQR PDGSRHTFSH
DSLGRVVELR EDPGEDDVVG QAIRGHAPAA PIRTTCERDG IGRLIAKRVQ AMTGAPSSQD
TIEQRFAYDK MNRLVRAETL DAAGQSPAQV AEFGYTLLGD LAQEAAEDVV SGTRSVMRHT
CDPLGNRLAT ELPDGRLLRE LHYGSGHVHQ ISLDGVVVAD IERDDLHREV LRTQGRWASR
WAYDPLGRQR AQWTQSASLR VGGNWAQQMP DAANASGPGM LTDGLRKQWD YDAAGELVRT
RHSRNGETQY RYDPAGHVLS ATLQAAGAAG GLSPALQQAL HEVFHYDPAG NRLDAPVPQG
AEGSRGWVRH NRVKVLQDKR FDYDGFGRLV RKRIGGHTEL HCRYDALHRM IAASVIRAGR
DGEPIRQVFR YRYDPLGRRI AKEDDFGETR FVWEGMRLLQ ESRGAHNSTY LYEPSSYRPL
ARIDGTGPLE PEHPVAVLAL AGEDPRGDPA AGKVRSIPVT NGDASDARHA VAGPVGATAR
YLAEVEALER GAGPDEPGQS TGRGGQARQT QSASTPSARI YYFHLQPSGL PEEMSDRNGH
LVWRAQYRLW GNAVAEEWQA FDATGRPVNA PMAETGIRAQ VSASPAPQNL RMQGQYLDRE
TGLHYNTFRY YDPDLGAFTT PDPIGLAGGL NLHGYAANPL SWIDPWGWAC IPNKVAGTAR
EARVGAKLDG KFGASNVLRE RYLRDANGKI VRDPLTGEAR RVDFVVKGSD GKGTAIEVTS
KTANKDAQQL KEARIRAQGG VYVREPGSKV LVEVRNTSRV VRVE
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