| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0449 |
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| Symbol | |
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| ID | 4669734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 485546 |
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| End bp | 486208 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639821656 |
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| Product | type III secretion system protein |
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| Protein accession | YP_968830 |
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| Protein GI | 120609152 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.181811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGA TCTCGGGACT CGATCCCGTC TCGCTGGCGC TGGCGCTGAT GCTGCTGGCG
GTGCTGCCGT TCGCCGCCAT GATCGTCACG TCCTACACCA AGGTGGTGGT GGTCCTGGGC
CTGCTGCGCA ACGCGCTCGG CGTGCAGCAG GTGCCGCCCA ACATGGTGCT CAACGGCATC
GCCATCATCA TTTCGGTGTA CGTGATGGCG CCGGTCGCCA TGGAGGCTTC CGACCGCATG
CAGATGCTGC CGCCTTCCGC CCAAAGCTCC AACACCCAGC AGATGCTCGC TGCCGCCTCC
GCCGCCCGTG AACCGTTCCG CAAGTTCCTG GACAAGCATG CCGACGCCGC CGAGAAAGCG
TTCTTCCTCA AGTCGGCCCA GGCGCTCTGG CCCGAGGAAC GCGCCCGGTC GCTGCAGGCC
GACGACCTCG TCGTGCTGGC GCCCGCCTTC CTGCTCACCG AACTCACGGC CGCCTTCCGC
ATCGGTTTCC TGCTGTACCT GGCCTTCATC ATCGTGGAGC TGGTCATCGC CAACGTCCTG
CTGGCCATGG GCCTATCCCA GGTTTCCCCC ACCAACGTCG CCATTCCCTT CAAGCTGCTG
CTGTTCGTCG TGCTCGACGG ATGGTCGCAG GTGATGCACG GACTGGTCAT GACCTACCGC
TGA
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| Protein sequence | MTPISGLDPV SLALALMLLA VLPFAAMIVT SYTKVVVVLG LLRNALGVQQ VPPNMVLNGI
AIIISVYVMA PVAMEASDRM QMLPPSAQSS NTQQMLAAAS AAREPFRKFL DKHADAAEKA
FFLKSAQALW PEERARSLQA DDLVVLAPAF LLTELTAAFR IGFLLYLAFI IVELVIANVL
LAMGLSQVSP TNVAIPFKLL LFVVLDGWSQ VMHGLVMTYR
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