| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0389 |
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| Symbol | |
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| ID | 4666243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 418782 |
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| End bp | 420086 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639821595 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_968770 |
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| Protein GI | 120609092 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCGCT TGAGTGTCGA AACCGCCGTC TCCGCCGCCC CGCTCCGCCG CACAGCGCGG
TCGGGGCTTT TCTGCCTGGC CCTGCTCGCA GCCGCCACTC TGGCGGCCTG CGGCAAGTCC
GGCGGGTCCG ACCAGCAGGG CCAGGGCGGC ACCCCTCCGC CACCGCAGGT GGGCGTGGTG
ACCGTCTCGC CGGGGGACGT GGGCCTGGTG ACGGAGCTTC CGGGCCGCCT GGAAGCATCG
CGGGTGGCCC AGGTCCGCGC CCGAGCGGCC GGCATCCTGC AAAAGCGGCT CTTCACGGAA
GGCAGCGACG TCAAGGCGGG CCAGCGCCTG TTCGCGATCG ACGACGCGCC CTACCGCGCC
TCGCTGGAAA GCGCCCAGGC GAGCGTCGCC CAGGCCGAAG CCAATGTGGC CCAGGCCCGG
GCCCTGGCCG AGCGCTACAA GCCACTGGTG GCCGTGAATG CCGTGAGCCG GCAGGAGTAC
GACAACGCGG TCGCGTCCCA GAAGACGGCC GAGGCCAACC TGGCGGCAGC GCGTGCATCC
GTCACCACGG CCCGCATCAA CCTGGGCTAC GCGGCCGTGA CGGCGCCCAT CTCCGGCCGC
ATCGGCCGCG CGCTCGTCAC CGAGGGCGCG CTGGTGGGCC AGGGCGAGGC CACGCAGCTC
GCGGTGATCC AGCAGATCGA TCCGCTCTAC GTCAACTTCA CCCAGTCCGC CTCCGACGCC
CTGAAGCTCA AGGCCGGCCT CGCGAGCGGC AAGTACAAGC AGGCTGCAAA GGGCGCCGCC
TCGGTCAGCG TGGTCATGGA AGACGGCAGC GTGCATCCGC AGACGGGCAA GCTGCTGTTC
ACCGACCTGT CGGTGGACCC CACCAGCGGC CAGGTCACGC TGCGCGCCGA AGTGCCCAAT
CCCGAACGGC AGCTGCTGCC CGGCCTGTAC GTGCGCGTGC GCCTGGAGCA GGCCCAGGTG
GACAACGGTG TCCTGCTGCC CCAGCAGGCC GTGACGCGCT CCGCCAGGGG CGATACCGTC
ATGGTCGTGG GCCCGGACAA CCACCTGGCG CCGCGCCCCG TGAAGCTCGG CCCGGCCCAG
GGCACCAACT GGGTCGTGCT GGATGGCCTG AAGGCCGGCG AGAAGGTCAT GGTGGACGGC
TTCCAGAAGC TGCCCCGCGG CAAGCCCGGC GACCCGATCG TGGTGCAGCC CGTGCCCTGG
CAGCCCGCCG GTGCCGCCCC CGCGGGCGGC GCATCGGCGC CCGCCGCCGG AGCTTCCGCC
GCACAGGCCC CCGCCTCCAG CGCCTCCGCC CCCGCGAAGC AGTAA
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| Protein sequence | MYRLSVETAV SAAPLRRTAR SGLFCLALLA AATLAACGKS GGSDQQGQGG TPPPPQVGVV
TVSPGDVGLV TELPGRLEAS RVAQVRARAA GILQKRLFTE GSDVKAGQRL FAIDDAPYRA
SLESAQASVA QAEANVAQAR ALAERYKPLV AVNAVSRQEY DNAVASQKTA EANLAAARAS
VTTARINLGY AAVTAPISGR IGRALVTEGA LVGQGEATQL AVIQQIDPLY VNFTQSASDA
LKLKAGLASG KYKQAAKGAA SVSVVMEDGS VHPQTGKLLF TDLSVDPTSG QVTLRAEVPN
PERQLLPGLY VRVRLEQAQV DNGVLLPQQA VTRSARGDTV MVVGPDNHLA PRPVKLGPAQ
GTNWVVLDGL KAGEKVMVDG FQKLPRGKPG DPIVVQPVPW QPAGAAPAGG ASAPAAGASA
AQAPASSASA PAKQ
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