Gene Aave_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0317 
Symbol 
ID4668882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp349588 
End bp351039 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content73% 
IMG OID639821523 
Productsensory histidine kinase CreC 
Protein accessionYP_968698 
Protein GI120609020 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCG GGCTGCGGCT GCTTTTCGCG TTCTTCCTCA TCAACGGCAT CGCGGCGTTC 
TTCGTGCTGC GGGTGTTCAC GGCCGAGATC AAGCCCAGCG TGCGGGAGGT GATGGAGGAC
ATGATGGTGG ACACCGCCAA CCTGCTGGCG GAGCTGGCGA GCGACGACCT CGCGAGCGGG
CGCCTGGCGG CCGGCGCGCA GAACAGCGAT TTCGCGCGCC ACGTGCAGCG CTACGCAAGC
CGGCCGGTCG ATGCCTCCAT CTGGGGGCTG TCCAAGCAGA CGCTGGATTT CCGCATCTAC
GTGACCGATG CGCGCGGGCG CGTGGTCTTC GATACCGAGC GGCGCGCCGT GGGCGATGAC
TATTCGCAGT GGCGCGACGT GGCCCGCACG CTGCGCGGTG AATACGGCGC CCGCGCCACG
CGCGACGTGC AGACCGACGA CACCAGCGGC GTGATGTACG TGGCCGCGCC GATCTGGATC
GACGGCCCCC CGGGCGGCGA GCGGCGGATC GGGGGCGTGC TCACCGTCGC CAAGCCGACG
CGCACGGTGC AGCGCTTCAT CGACCGGGCC GAACGCAAGG TGCTGCAGGG CGGATTGCTG
CTGCTCGCGC TCTCCGCGGC CGTGGGCGTG GCCGTCACCG TGTGGACCGT GTGGCACGTA
CGCCGCCTGC GCGACTATGC CCTCAGCGTG CAGGCACCGG GCGACGGGGG CGGGCCGCCG
CCCGCCGTGC CGCGCGTGCC CGGAGAACTC GGCGACCTCG CGCGGGCCAT GGACCACATG
CGCGAACGCC TCGCGGGCCG CGACTACATC GAGGGCTACG TGCGCGCCCT GACCCATGAA
CTCAAGAGCC CCGTGGCCGC CATCCGCGGC GCAGGCGAGT TGCTGCAGGA CGACCTGCCC
GGGGACGATC GCCGGCAGTT CGCGGCCCAG GTGGTGGACC AGAGCGAACG GCTGCAGCGC
CTCGTGGACC GCCTGCTGGA GTTGAGCAAG CTGGAGCAGC GCCAGCACGC GGAGGCCGGC
GCCGCACCGG TGGCCCTGCG CGCCTGCGCC GAGGCGGCCC TGCGCCAGTG CGAGGCGCGG
GCCTCCCAGC GCGGGGTGCG TCTGCAGCTG GAAGGGGACG GAGGAAGCGG TCCCTGGGAG
GCCGAACTCA TCACCCTGGC CCTGGGCAAC CTCATCGACA ATGCCATCGA CTTCTCGCCC
GAAGGCGGCA CCGTGCGCGT GGTGCTGGAC GGTGCCGCCG CTTCGGTGCA GGACGAAGGA
CCGGGGGTGC CGGACTACGC CCTGCCCCGG CTGGGCGAGC GGTTCTTCAC CACCGCACGG
CCGGACGGCA CGCGCAGCGG CTCGGGACTG GGGCTGGCGA TCGTGAAACG GGTCATGGCG
CTGCACGGCG GCCGGCTCGA CGTGGCCAGC ACCGCCCGGG GACTGCGGGC GACCCTGGTA
CTGGCCGGCT GA
 
Protein sequence
MRLGLRLLFA FFLINGIAAF FVLRVFTAEI KPSVREVMED MMVDTANLLA ELASDDLASG 
RLAAGAQNSD FARHVQRYAS RPVDASIWGL SKQTLDFRIY VTDARGRVVF DTERRAVGDD
YSQWRDVART LRGEYGARAT RDVQTDDTSG VMYVAAPIWI DGPPGGERRI GGVLTVAKPT
RTVQRFIDRA ERKVLQGGLL LLALSAAVGV AVTVWTVWHV RRLRDYALSV QAPGDGGGPP
PAVPRVPGEL GDLARAMDHM RERLAGRDYI EGYVRALTHE LKSPVAAIRG AGELLQDDLP
GDDRRQFAAQ VVDQSERLQR LVDRLLELSK LEQRQHAEAG AAPVALRACA EAALRQCEAR
ASQRGVRLQL EGDGGSGPWE AELITLALGN LIDNAIDFSP EGGTVRVVLD GAAASVQDEG
PGVPDYALPR LGERFFTTAR PDGTRSGSGL GLAIVKRVMA LHGGRLDVAS TARGLRATLV
LAG