| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0278 |
|---|
| Symbol | |
|---|
| ID | 4669748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 309745 |
|---|
| End bp | 310506 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 639821484 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_968659 |
|---|
| Protein GI | 120608981 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATTCCG GCGCCACGCT GTCCTGCACC CTCCGCCACT ACGGCGGGGA GCACGCCGCG
CATGCGCACG ACCATGCGCA GGTGCTGGTC GGGCTGCAGG GGCGCATGGA GCTGGAGGTG
GACGGCCGTT CGGCGTTCGT GGACGCCTCC TGCGGCATCC TGATACCCGC GGGCGCGCGG
CACGGCTACC TGGCCTCGCC CGGAGCCCGC TTCTGCGTGG TCGATGCGGC GGCGCAACCG
GGCATGGACC GGCTGCGCCG CTTCGCCGTG CCGGCCCAGG CGCGCGACGG CCTGGCGCGG
GCCATCGGCG GAGGGGCCGG CGGTGCGCCC TGCCTGCCCT CGCTGCCCGG CGTGTGGAGC
GCGCCCGTCG CGCAGGGGGG CCAGGTGGCC GCCCATCTGG AAGCCCTGCT GGGCCGTGCG
CCCCGCGTGC TGGCCCGCCG GGCACTGCCG CTGGAACGGC TGCAGCAGGC GGTGGAGGCC
GCCCTGCACG AGCCCTGGCC CACGCCCCGC ATGGCCGCCC TGTGCCACCT GAGCCCGCAG
CGCTTCCATG CCCGCTGGCT GGAACTCATC GGCGCGACGC CCCAGGCCTG GCTGCGCGGG
CTGCGCCTGG ATGCCGCCGC GCAGCGCATC GCGCGCGGAC AGCGGCTCGA CGATGCGGCG
CTGGCCTGCG GCTACGCCAC GGGTACCGCC CTCGCGAGCG CGCTGCGCCG GGAGCGCGGC
ACGGGTGCCC GCGCGTTGCG CGGAGACGCC GGCAGGGACT GA
|
|---|
| Protein sequence | MYSGATLSCT LRHYGGEHAA HAHDHAQVLV GLQGRMELEV DGRSAFVDAS CGILIPAGAR
HGYLASPGAR FCVVDAAAQP GMDRLRRFAV PAQARDGLAR AIGGGAGGAP CLPSLPGVWS
APVAQGGQVA AHLEALLGRA PRVLARRALP LERLQQAVEA ALHEPWPTPR MAALCHLSPQ
RFHARWLELI GATPQAWLRG LRLDAAAQRI ARGQRLDDAA LACGYATGTA LASALRRERG
TGARALRGDA GRD
|
|---|
| |