| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0270 |
|---|
| Symbol | |
|---|
| ID | 4668619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 299867 |
|---|
| End bp | 300898 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639821476 |
|---|
| Product | mannosyltransferase OCH1-related enzyme |
|---|
| Protein accession | YP_968651 |
|---|
| Protein GI | 120608973 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3774] Mannosyltransferase OCH1 and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGC CTGCCTTTCC CCGTCCCACG CTCAAGACGC ACGGCGAACT CTGGCTGGCG
CGCGCCCTGC GCTGGTTCTA CGGCCTGTGG CCGCGCCAGC TCGAAGCCTG CCCCCCGCCG
CCGTTCGCAC TGCATGCCAT CGCGCCGGCT CCCGGGGTTC CGGAGGGTGG CGAGGACGGG
ACGGACCGCT CGGCATTGCC CCCGATTCCG CGCGTCATCT GGGCCTACTG GAAGGGGGCC
GCGCCACCGC TGCTCATCCA GCGCTGCTTC GCCAACTGGC GGCGCAACAG CCCGGGCTAC
GAGATCCGCC TGCTGGACGA TGCTTCCGCC CGGGCGTGGC TGCCGGACAT TCCGGCCGTG
CTCGACGACG TGTCGCCCGC GAAACGCGCC GACTGGATCC GTCTGGAACT GCTGCGGCTG
CACGGCGGCA TCTGGGTGGA TGCCAGCACG ATCCTCACGG CACCGCTGGA CTGGGTGCTG
GCGCAGCAGG AGCGCACCCC GGCCGACTTC GTGGGCTTCT ACCTCGGGCG CCACACCCGC
GATGCGGCCT ATCCGGTGGT GGAGAACTGG TTCATGGCCG CCCCGCCGGG CAGCCGGTTC
ATCGCCGACC TGCAGCAGGA GTTCACGACC CAGGTGATCC ACCGCTCGGG GCACGAATAC
ATCGCCCACC TGCAGGCCCT GGGCGTGTAC GAGGAGGTGC GTCAGTACAT CGACGCGCCG
GACTACCTCA GCATGCACCT GGCGCTGCAG TTCATCCTGC GCGCGCGCGG CGGCTACCGG
CTGGCGCTGG CCCGCGCGGA AGACGGGCCG TTCTACTACC ACATGCTCGG GCGCTGGCGG
CGCACGCAGC TCAAGCTGCG GCTGCTGTTC TCGCGGCCCA CGGGCGCGTT GCCGCCCCTC
ATCAAACTGC GCGCGCCCGA CCGCAGGCGG CTGGACGACT ATCTGGCGCG GGGCCTGTAC
CTTCCGGACA GCATCGCCGC GCGGCAGCTC ATGGCGGAAA CCGGCGCGGT CACGCCGGCG
AGCCCGCGCT GA
|
|---|
| Protein sequence | MNLPAFPRPT LKTHGELWLA RALRWFYGLW PRQLEACPPP PFALHAIAPA PGVPEGGEDG
TDRSALPPIP RVIWAYWKGA APPLLIQRCF ANWRRNSPGY EIRLLDDASA RAWLPDIPAV
LDDVSPAKRA DWIRLELLRL HGGIWVDAST ILTAPLDWVL AQQERTPADF VGFYLGRHTR
DAAYPVVENW FMAAPPGSRF IADLQQEFTT QVIHRSGHEY IAHLQALGVY EEVRQYIDAP
DYLSMHLALQ FILRARGGYR LALARAEDGP FYYHMLGRWR RTQLKLRLLF SRPTGALPPL
IKLRAPDRRR LDDYLARGLY LPDSIAARQL MAETGAVTPA SPR
|
|---|
| |