| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0243 |
|---|
| Symbol | |
|---|
| ID | 4668666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 273299 |
|---|
| End bp | 274069 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639821449 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_968624 |
|---|
| Protein GI | 120608946 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3619] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTTC TGAGGCACCT CATGGGGCGG CACCGCACGC CGGCCACCAA CCGGCTGCTG
GGCCTGCTGC TGGCGTTCAA CGCGGGCGCG GTGAACGCGG GCGGCTTTCT CGTCGTGCAC
AGCTACACCT CGCACATGAC GGGTTTCCTG TCCACCGTGG CCGACAACCT CGTGCTGGGC
AACATGGCCC TGGTGCTGGC CGCCGTGGGC ACGCTCTGGG CGTTCATGTC GGGCGCGGGC
ACCACCGCGA TCATGGTGAA CTGGGCGCGC CACCACCGGC TGCGCAGCGG GTTCGCGCTG
CCGCTGCTGC TGGAAGCCGT GCTGATGCTG CTGTTCGGGC TCATGGGCGC GATCACGCTG
GGCTGGCCCA CGCCGTTCTC GGTGCCGCTC ACGGTGCTGC TGCTGGCCTT CCTCATGGGG
CTGCAGAACG CGGTGGTGAC CAAGATGTCT TCCGCCCAGA TCCGCACCAC GCACATGACG
GGCGTGGCCA CCGACCTGGG CATCGAGATG GGCAAGATGC TCTACTGGAA CCGGCGCGGC
ACCCCGCCCG AGGCGCACGT GCACTCCAAC CGCGCCCGGC TGGTGCTGTT CGCGAGCCTG
CTGGGCATGT TCACGGCCGG CGGCATCGTG GGCGCGGCCG GCTTCAAGCA TGTGGGCTTC
GTCTGGGTGG TGCCGCTCGC GGCGGTGCTG CTGGGGCTCG CGCTGCCGCC GCTCGCATCG
GATTTCGGGC ACCTGGCCGC GCTGTGGCGC ACGCGCCGCC ACCGCCATTG A
|
|---|
| Protein sequence | MRLLRHLMGR HRTPATNRLL GLLLAFNAGA VNAGGFLVVH SYTSHMTGFL STVADNLVLG
NMALVLAAVG TLWAFMSGAG TTAIMVNWAR HHRLRSGFAL PLLLEAVLML LFGLMGAITL
GWPTPFSVPL TVLLLAFLMG LQNAVVTKMS SAQIRTTHMT GVATDLGIEM GKMLYWNRRG
TPPEAHVHSN RARLVLFASL LGMFTAGGIV GAAGFKHVGF VWVVPLAAVL LGLALPPLAS
DFGHLAALWR TRRHRH
|
|---|
| |