| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0182 |
|---|
| Symbol | |
|---|
| ID | 4666928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 203708 |
|---|
| End bp | 204691 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639821393 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_968568 |
|---|
| Protein GI | 120608890 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2367] Beta-lactamase class A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.689531 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGAAGC TCGAACGCGA AACGCCCGGC CAGTTCGGCC TGTACGTGAA ACGCCTGGAC
AACGGCGAGA CCTTCGCGTG GCAGGCGGAC CGGCGCTGGT ACCTGGCATC GTCCGCGAAG
CTGCCCCTGG CCATCGCGGT GCTGCAGGAG GTGCAGCAGG GCCGCCTGCG CCTGGACCAG
GAACTGCGCG TGGAAGAGCG CGACAAGATC GACGGCTCGG GTGCGCTGGT CTGGCAGCCC
GTGGGCACGC AGCACAGCGT GGAGACGCTG CTGCGCCGCA TGCTGATGGA CAGCGACAAC
ACCGCGGCGA ACCTGCTGAT CCGCACCATC GGGCCGGACA CGTTCAATAC ACGCGCCCGG
GCGCTGATGG GCGCGCGCAA CGTGGGGCCG CTCACCAACT TCACCCAGGT GCGCCAGGAT
GTGTACGCGG AGCTGCATCC CCGCGCGCGA GAGATCGCGC CGATGGAACT GGTGCGCGTG
GCCGCGGCCC CCATGGGCTC GCAGCGCGTG CAGGCTTTGG CCCGCACGCT GCAGGTCCAG
AAGGATGACC TGAAGGTGAA GACGATGGAA GAGGCCTACG ACCGCTACTA CGCGTGGGGC
ACCAACACCG CCACCCTGGC GGGCTACGGC GGCATGCTGG AAAAGCTGGT GCGCGGCCAG
TTGCTGACGC CGCCGCACCA GCAGATGCTC TACAAGGACC TGAAGTTCGA CACCTATGAC
GCCTACCGGC TGGAAGCCGG GCTGCCGCGC ACCGTGCGCT TCATCCACAA GACCGGCACG
CAGTACCACC GCGCCTGCCA CATGGGTGTG ATCGATCCGC AGGACGGGGG CGCGCAGGCG
ATCGTAGTGG CTACCTGCGC CGAGGACATG GACGAGATGC GCCAGGCGGG CCGCCTGTTC
GAGCAGCTCG GGCGCGCGAT CACCCGCACG CTGCTGAAGG ACCGCCCGGC CACCGGTCCG
GGCGCGGCGC AGGCCAGCGG CTGA
|
|---|
| Protein sequence | MEKLERETPG QFGLYVKRLD NGETFAWQAD RRWYLASSAK LPLAIAVLQE VQQGRLRLDQ
ELRVEERDKI DGSGALVWQP VGTQHSVETL LRRMLMDSDN TAANLLIRTI GPDTFNTRAR
ALMGARNVGP LTNFTQVRQD VYAELHPRAR EIAPMELVRV AAAPMGSQRV QALARTLQVQ
KDDLKVKTME EAYDRYYAWG TNTATLAGYG GMLEKLVRGQ LLTPPHQQML YKDLKFDTYD
AYRLEAGLPR TVRFIHKTGT QYHRACHMGV IDPQDGGAQA IVVATCAEDM DEMRQAGRLF
EQLGRAITRT LLKDRPATGP GAAQASG
|
|---|
| |