Gene Aave_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0180 
Symbol 
ID4666866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp200469 
End bp201452 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content70% 
IMG OID639821391 
Producthypothetical protein 
Protein accessionYP_968566 
Protein GI120608888 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.3063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTT CCCTTTCCCG CGCCCTGCGG CGGGCCTGCG GCGCCATGGC CGCGCTGGCC 
GCGACGGCAG CGCTGGCCCA GGCGCCCGAC TACCCCGATG CGCCCATCAC CCTCATCGTG
CCCTTCGCCG CCGGCAGCGG CACGGACGCC GTGGCGCGCA CCGTGGGCCA GAAGCTGGCC
GAGCGCCTGA AGCAGCCGGT GCTGGTGGAC AACAAACCCG GCGCCAACGC CCAGGTGGGC
GCCCAGCTGG CGGCCCGGGC CATGCCCGAT GGCTACACGC TGTTCATGAC GACGAACACC
TCGCATTCGG CCAATCCGGC GCTCTACGCC AGCCTCAAGT ACGACCCCAT CAAGGATTTC
ACGCCCGTGG CCCGCGTGGG CGAACTGCCC TTCGCGCTCG TGGTGAGCCC GGCCCTGCCG
GTGAAATCGC TGCCCGAGTT CCTCGACTAT GCCCGCGCCC GCCCCGGCAC GCTGAGCTAC
GCCACGCCCA ACAGCACATC GCTGGTGGCG ATGGAGAGCA TCAAGCACAT CGCGAAGGTG
GACATCCTGG GCGTGCCCTA CAAGTCCAGT CCCCAGGCGC TCACCGACCT GCTGGGCGGG
CAGGTGCAGG CCTACGTGGT GGACCTGGGA TCGGGCAAGA CCATGCTCAC GGGCGACAAG
GTGCGCACGC TGGGCATCAC CACCGCCAAG CCCTCGCCCC TGCTGCCGGG CGTGCCACCC
ATCGGCCAGA CGGTGCAGGG TTTCGACCTG ACGTCGTGGA ACGGCATCTT CGGCCCGGCC
GGCATGCCGC CCGCCGTGGT GCAGCGCCTG AACACCGAGC TGCAGGCCGT GCTGGCCGAC
AGGGACACGC AGGACAAGCT CGCGCAGATC GGCTTCCAGG TCTGGCCCAG CAAGACGCCG
GAGGAATTCG CGCAGTACGT GGCGCAGCAG CTGGCGCACT GGCGCACTTT GATCCGGCAA
GCCGGTATTG AACCAACCCC CTGA
 
Protein sequence
MRFSLSRALR RACGAMAALA ATAALAQAPD YPDAPITLIV PFAAGSGTDA VARTVGQKLA 
ERLKQPVLVD NKPGANAQVG AQLAARAMPD GYTLFMTTNT SHSANPALYA SLKYDPIKDF
TPVARVGELP FALVVSPALP VKSLPEFLDY ARARPGTLSY ATPNSTSLVA MESIKHIAKV
DILGVPYKSS PQALTDLLGG QVQAYVVDLG SGKTMLTGDK VRTLGITTAK PSPLLPGVPP
IGQTVQGFDL TSWNGIFGPA GMPPAVVQRL NTELQAVLAD RDTQDKLAQI GFQVWPSKTP
EEFAQYVAQQ LAHWRTLIRQ AGIEPTP