Gene Aave_0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0177 
Symbol 
ID4666429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp197551 
End bp197997 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content71% 
IMG OID639821388 
Productcupin 2 domain-containing protein 
Protein accessionYP_968563 
Protein GI120608885 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.178476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCA CCACGACAGT CCCCACGACG ACCGCCATGA CCACTCCCGA CGCCCCCTCC 
CGCTACCTGG TGCGCGCCGC CCAGGTGCCC GGCTACCAGC CCGCCAACCA CCACCACACC
GTGAACCAGC GCCTGATCGG CCCCGAGACC GTGGGCGCGC GGCAGATGGA AGTGCTGCTC
GGCACGCTGC ACAAGGGCGG CGGCGCGCTG CCGCACGCGC ACCCGGGCAT CGAGCAGGCC
TGCTATCTGC TGGAAGGCAC GGCCCGCGCC GAGGTGGAGG GCGAGGCCTT CGACATGGTG
CCGGGCGACA TGTGCTTCTT CCCGGCCGAC CGCATGCACG TGTTCACCGT GACCAGCGAC
ACGCCCGTGA AGCTCCTGGT GATCTACAGC CCGCCCTACG GCGAATCGCC CGACAAGGTG
ATCCGCCCGG CCGGGAAAGG CGCGTGA
 
Protein sequence
MTPTTTVPTT TAMTTPDAPS RYLVRAAQVP GYQPANHHHT VNQRLIGPET VGARQMEVLL 
GTLHKGGGAL PHAHPGIEQA CYLLEGTARA EVEGEAFDMV PGDMCFFPAD RMHVFTVTSD
TPVKLLVIYS PPYGESPDKV IRPAGKGA