Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0177 |
Symbol | |
ID | 4666429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 197551 |
End bp | 197997 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639821388 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_968563 |
Protein GI | 120608885 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.178476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCCA CCACGACAGT CCCCACGACG ACCGCCATGA CCACTCCCGA CGCCCCCTCC CGCTACCTGG TGCGCGCCGC CCAGGTGCCC GGCTACCAGC CCGCCAACCA CCACCACACC GTGAACCAGC GCCTGATCGG CCCCGAGACC GTGGGCGCGC GGCAGATGGA AGTGCTGCTC GGCACGCTGC ACAAGGGCGG CGGCGCGCTG CCGCACGCGC ACCCGGGCAT CGAGCAGGCC TGCTATCTGC TGGAAGGCAC GGCCCGCGCC GAGGTGGAGG GCGAGGCCTT CGACATGGTG CCGGGCGACA TGTGCTTCTT CCCGGCCGAC CGCATGCACG TGTTCACCGT GACCAGCGAC ACGCCCGTGA AGCTCCTGGT GATCTACAGC CCGCCCTACG GCGAATCGCC CGACAAGGTG ATCCGCCCGG CCGGGAAAGG CGCGTGA
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Protein sequence | MTPTTTVPTT TAMTTPDAPS RYLVRAAQVP GYQPANHHHT VNQRLIGPET VGARQMEVLL GTLHKGGGAL PHAHPGIEQA CYLLEGTARA EVEGEAFDMV PGDMCFFPAD RMHVFTVTSD TPVKLLVIYS PPYGESPDKV IRPAGKGA
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