Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0171 |
Symbol | |
ID | 4666453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 190402 |
End bp | 191148 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639821382 |
Product | putative secreted protein |
Protein accession | YP_968557 |
Protein GI | 120608879 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0836284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00335294 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGACCCA ATACCCTGAC CCGCGCCGGC CTCGCCGCCC TCCTGCTCGC CTGTGCCGGA GCGCAGGCCC AGCCCGCCCC CCCGGCCCCC GGTGCCGTTC CGCCGCCCCC CGGTGCCGTT CCGCCGCCCC CCGTGGCAGG CCAGCCGCCC GGCCCGATCG GCCAGCCTGC CGCCGTGGAG CAGGCCTCGC ACAGCGGCGC CGTGCAGCGC TGGCTGCTCA ACCCCAACGG CGAAGCCGAC GGCCTGCTGC TGCAGGATGG CGCGCAGGTG GCCTTCCCGC CGCACCTGTC CGATACCCTG ACATCCTGGC TGCGCCCCGG CGACGCCGTG GACGTGGCCG GCTGGCACTA TTCCGGCGTG CCCGTGCTGC GCATCAGCGC GATCAGCTCG CAGGGCCGCA CCGTCCAGGA CACGCCCCCG TCCCCGGGCC AGATGCCTCC GCCCCCGCCG CAGCGCCCTG CCCTGGTCGA ACTGCAGACC GACGGGCGCG TGGCTACCGT CCTGCTCAAC ACCCGCGGCG ATGCCCACGG CCTGCTGCTC GACAACGGCG TGATCGTCCG CTTCCCGCCC CATGTGGCCG CCTCCATCGG CAACCTGCTG CAGACCGGCG CCACCGTGTC GGCCCGCGGC TGGGGCACGC GCAACGCGCT GGGCACGGCG CTGGAAGCCA CGCAGTTGGG CTCCTCCGCC AGCACGCTGC AGGAAGTGTT CCGCGGCCCG GCCGGCGGCC CTCCCCGCCG CCCCTGA
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Protein sequence | MRPNTLTRAG LAALLLACAG AQAQPAPPAP GAVPPPPGAV PPPPVAGQPP GPIGQPAAVE QASHSGAVQR WLLNPNGEAD GLLLQDGAQV AFPPHLSDTL TSWLRPGDAV DVAGWHYSGV PVLRISAISS QGRTVQDTPP SPGQMPPPPP QRPALVELQT DGRVATVLLN TRGDAHGLLL DNGVIVRFPP HVAASIGNLL QTGATVSARG WGTRNALGTA LEATQLGSSA STLQEVFRGP AGGPPRRP
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