Gene Aave_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0171 
Symbol 
ID4666453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp190402 
End bp191148 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content76% 
IMG OID639821382 
Productputative secreted protein 
Protein accessionYP_968557 
Protein GI120608879 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0836284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00335294 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGACCCA ATACCCTGAC CCGCGCCGGC CTCGCCGCCC TCCTGCTCGC CTGTGCCGGA 
GCGCAGGCCC AGCCCGCCCC CCCGGCCCCC GGTGCCGTTC CGCCGCCCCC CGGTGCCGTT
CCGCCGCCCC CCGTGGCAGG CCAGCCGCCC GGCCCGATCG GCCAGCCTGC CGCCGTGGAG
CAGGCCTCGC ACAGCGGCGC CGTGCAGCGC TGGCTGCTCA ACCCCAACGG CGAAGCCGAC
GGCCTGCTGC TGCAGGATGG CGCGCAGGTG GCCTTCCCGC CGCACCTGTC CGATACCCTG
ACATCCTGGC TGCGCCCCGG CGACGCCGTG GACGTGGCCG GCTGGCACTA TTCCGGCGTG
CCCGTGCTGC GCATCAGCGC GATCAGCTCG CAGGGCCGCA CCGTCCAGGA CACGCCCCCG
TCCCCGGGCC AGATGCCTCC GCCCCCGCCG CAGCGCCCTG CCCTGGTCGA ACTGCAGACC
GACGGGCGCG TGGCTACCGT CCTGCTCAAC ACCCGCGGCG ATGCCCACGG CCTGCTGCTC
GACAACGGCG TGATCGTCCG CTTCCCGCCC CATGTGGCCG CCTCCATCGG CAACCTGCTG
CAGACCGGCG CCACCGTGTC GGCCCGCGGC TGGGGCACGC GCAACGCGCT GGGCACGGCG
CTGGAAGCCA CGCAGTTGGG CTCCTCCGCC AGCACGCTGC AGGAAGTGTT CCGCGGCCCG
GCCGGCGGCC CTCCCCGCCG CCCCTGA
 
Protein sequence
MRPNTLTRAG LAALLLACAG AQAQPAPPAP GAVPPPPGAV PPPPVAGQPP GPIGQPAAVE 
QASHSGAVQR WLLNPNGEAD GLLLQDGAQV AFPPHLSDTL TSWLRPGDAV DVAGWHYSGV
PVLRISAISS QGRTVQDTPP SPGQMPPPPP QRPALVELQT DGRVATVLLN TRGDAHGLLL
DNGVIVRFPP HVAASIGNLL QTGATVSARG WGTRNALGTA LEATQLGSSA STLQEVFRGP
AGGPPRRP