| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0059 |
|---|
| Symbol | |
|---|
| ID | 4669660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 63908 |
|---|
| End bp | 65269 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639821273 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_968448 |
|---|
| Protein GI | 120608770 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1232] Protoporphyrinogen oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG CTGCTTTCTC TTCCGCCACG TCCGCGGCCG ACTCCGCCAT GGCTCGCGGC
CAGCGCATCG CCGTGCTCGG CGCAGGCCCC ATGGGCCTGG CCGTGGCCTA CCAGCTCGCG
CGCGACGGCC ACCGGCCCGT GGTGTTCGAG GCCGACGACC GCGTGGGCGG CATGACCGCG
ATGTTCGACT TCGACGGCCT GCCGATCGAA CGCTACTACC ACTTCCACTG CACCTCGGAC
CACGACTTCC TGCAGGTGCT GGATGAGCTC GGCCTGGCCG ACAAAATGCG CTGGCGCGCC
ACGCGCATGG GCTACTGGTT CCAGAAGCGC CTGCAGGCCT GGGGCAACCC GGTGGCGCTG
CTGCGCTTCC AGGGCCTGGG GCTGGTGGCG AAGTTCCGCT ACGGCCTGCA TGCCTTCCTC
TCCACCAGGC GGGACGACTG GAAGCCGCTC GACGGCGTCG AGGCCACGGG CTGGATCCGC
CGCTGGGTGG GCGCGGAGGC CTACGAGGTG CTGTGGCGCC GCCTCTTCGA GTACAAGTTC
TACGAGCACA CGGGCAACCT CTCGGCCGCC TGGATCTGGA GCCGCATCCG CCGCATCGGC
CGCTCGCGCT ACAGCCTCAT GCAGGAAAAG CTCGGCCACC TGGAGGGCGG CTCCGCCACG
CTGCTGGATG GCATGGCCGC GGACATCCGC GCGCACGGCG GCGAGATCCG CCTCTCCACA
CCCGTGACCC GGGTGCGCAT GGAGGCGGGC CGCGTGCAGG GCGTGGAGAC GGCGCAGGGC
TTCGAGGCCT TCAACAAGGT GGTGAGCACC GTGCCCCTGC CCTTCGTGCC GCGCCTGATG
CCGGACCTGC CACAGGACGT GCTCGCGCGC TTCGCGGCGC TGAAGAACAT CGCCGTGGTC
TGCGTGATCG CCAAGCTGCG CAAGCCGCTC ACCGAGAACT TCTGGCTCAA CGTGAACGAC
CCGGAGATGG ACATCCCGGG CCTGGTGGAA TACAGCAACC TGCGCCCGCT GCCGGAATCC
ATCGTCTATG TGCCGTTCTA CATGCCCGGC GAACACCCCA AGTACGCCGA GCCCGACCAG
GCCTTCCTGG ACAAGGTGAA GCGCTACCTG CGCACCATCA ATCCCGCGCT GCAGGATAGC
GACTTCCTCG CGATGCGCGC GAGCCGCTAC CGCTACGCGC AGCCGATCTG CCCGCCCAAC
TACCTGGAAA GCCTGCCGCC CGTGCAGTTG CCGGTGCAGG GCCTGTGGGT GGCCGATACG
TCCTACTACT ACCCCGAGGA CCGCTGCATT TCCGAGAGCA TCGGCTTCGG CCGCCGCATG
GCGCGCGACG CAGCCCAGGC TGCCACAGGC TCTCGCCCGT GA
|
|---|
| Protein sequence | MNAAAFSSAT SAADSAMARG QRIAVLGAGP MGLAVAYQLA RDGHRPVVFE ADDRVGGMTA
MFDFDGLPIE RYYHFHCTSD HDFLQVLDEL GLADKMRWRA TRMGYWFQKR LQAWGNPVAL
LRFQGLGLVA KFRYGLHAFL STRRDDWKPL DGVEATGWIR RWVGAEAYEV LWRRLFEYKF
YEHTGNLSAA WIWSRIRRIG RSRYSLMQEK LGHLEGGSAT LLDGMAADIR AHGGEIRLST
PVTRVRMEAG RVQGVETAQG FEAFNKVVST VPLPFVPRLM PDLPQDVLAR FAALKNIAVV
CVIAKLRKPL TENFWLNVND PEMDIPGLVE YSNLRPLPES IVYVPFYMPG EHPKYAEPDQ
AFLDKVKRYL RTINPALQDS DFLAMRASRY RYAQPICPPN YLESLPPVQL PVQGLWVADT
SYYYPEDRCI SESIGFGRRM ARDAAQAATG SRP
|
|---|
| |