| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2939 |
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| Symbol | |
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| ID | 4664814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 3439486 |
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| End bp | 3442881 |
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| Gene Length | 3396 bp |
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| Protein Length | 1131 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639821200 |
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| Product | SNF2-related protein |
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| Protein accession | YP_968377 |
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| Protein GI | 120603977 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGCT CGCTTGTCTG GCAACGTCAG CAGCACGGTG TAGCCTTCAG CGCCACGGAG
GATGATGCGC TCCTTCCGGT GGGCACATGG GCACGCCAGC CCCTTTCCCT GCCCAATGGT
CGCATCGCTT CGACAGGGCC GCTGCTACAC CTTCTCGAAG AAGAAAAAGT CACCCTTGAT
GCAGCTGAAA CGACCCTCAC TGTGCCCGAC GCTGTGCTTG CGACCTTGGA CGCGTGGCAG
ACCGATGCCT TGGGACTACC TGCTCATGCA CCGGTGAGGC TCACGCTCTC GGCACAAGGG
ACACTGGCGA GCGCAGCCTT CCGGCTGCGC TATGGCTTCA CCTTCGACGA CGGGTTGCCA
GCCACAGGTG CATCCATCGA TGGCGTCTTA TTCCACCACG GCAAGCGTGA CTATCTGCTC
CCCGACCCTC TCTATACCAT CGTGGCGCGC ATCGACGCCT ACAATGCCGC ACCGCTTCAG
GACATGGACG AGCGTTTTCT GTGGTGGAGT GAACTTGCCG CCCTGCTGCC TGATGCCGCA
TCCTTTCCGA GTGAGTTCTT CCGGCAGATG CACACCGTCC GTCCCGATTC GTTCAGTCTC
GACTTTCGCG AAGAGGGCGG ACGTCTGCGC ATCCTGCCCC GCTTCGTCCG CAGTCTGCAT
CGTGAAGATA ACGATTACGG CGGCGAGCTC CATGAAGACA TCCTGCCTGC CGCCCCCAAT
GAGGACTTCC AGCGCCGCTT CTTCGGGCAG GTGCATCCCG GCGGGCGTTA TGCCCTTCCC
GGCAACTGGT TCGTCGTGCT TCCCCCTCCC CTTCGAAGTG CCCTTGAGGT TGTTCACCGC
ATCAACGGGG CAAGCGAATC TGAAAAACGC CAGTTCCTGC ACAATCCGCG TGCCGCTATC
CGGGAGCGTC TCGAAGCCCA CTATGGCGAC AATGCCGAAG TCGTCATGGA CAGCCTCTTT
CAGGAGACAC CGCTTTTTCT GAGCGAACGC ATCAAGCACC TTGGCGTATG GGAACCCAAG
GGTGGCTTCT ACATCAAGAC GCAGGGCGGA GACTGGTTTC CCGGCGACCC ACCGCCACAA
AGCCTCCTTC TGCCGATAGG GCCACAAGGC GCATTGGTTG ACGTTCGCCC CGCTGACATC
GCACCGATCA AGGCGTGCAT CGCCGATGCC AAGACCCGGG GGCAAGGTGC GGCCTCCTAC
AACGGAACGA CTGTCAGCAC TGGCGATGCG GCATTATCGC TTCTGGAACG TGCGGAACGC
ATGTTCGTAC CGCACGCCCC CGATAACAGC GCCACCGACG GCCCTGCCGA CAACAGCGAA
GAGATGTCGG ACGACGGGCA GGTCAACGCA AATGCCGACG CACCTGTCGT GCCCATCATC
TTCGATCATA TCGACGAGAC AGGTGTCCGA AGAGAGGCCG AAAACCTGCG GCAGACCGTA
GCTGCAGCGC CTTTCCTACG TCCCGGCATC GCACTTCACG AGCACCAGCA CGAAGGGCTT
GCTTGGCTGC AGGAGCACTG GCGGCACTCG TCACCGGGAG CCCTCCTTGC AGACGACATG
GGCCTTGGCA AGACGTTGCA GACACTGGCC TTTCTCGCAT GGGTCAGGGC ACAGCAGAAA
CACGGCGTCG TGCCAGGACG CCCTTTTCTC ATCGTGGCCC CCACAGGGCT TTTGAAGAAC
TGGGAAGAAG AAGCTGATAA ATTTCTTATG GAACCGGGCC TTGGCCCCGT GTTCAGAGCA
CACGGCGGAG ACCTGCGGGC ACTCATGGCC CGTGGCACGA TGGCAACAGC CCGCGAATTT
GAAAACAGCG GACTTGTCCT GACAACCTAC GAGACACTTC GGGACAAGAT TGCCGTCTTC
ATCGCCGTGC ATTGGGGCGT TACGGTCTTC GACGAAGCAC AGAAGATCAA GAACCCCAAA
GCGATGATGA CGGACATGGC GAAATCGCTG AAGTCCGAAT TCTCCATCGC TCTCACGGGC
ACCCCGGTGG AGAACTCTCT GGCAGACCTC TGGTGCATCA TGGATGCTGT GCATCCCATG
CGTCTTGAAA CATTCAAGGC GTTCACCGGC ACCTACATGC CAGCAGGTCT GCACTCCACC
GAGACCCTTG CCGCACTCAA GGATGAACTG GCAAAACCCG AAGGTTTTCC CAGCCTTTTA
CGCCGCATCA AGGAACGCAA CTGGAAAGAG CGTCCCGCCA AGCACCAGAA TCCAGTGCGC
ATCACCATGC CCCCCGAACA GGCGCAGGCT TACAGGCAAG CCCTGAACAA GGCCGTGGAG
GATGCGGGAC GCCCCGGTGC GACCCTTGAA GCGTTGCAGC ATATCCGCAC CATCGCCCTG
CATCCCTTCA CTCCGGCGTG GGGTACCATG ACGCCCGACG CCTTCGTCAA TGCCTCGGCA
CGTCTCATGG GAACCTTTGA ACTTCTCACA GACATCAGGA GTAAAGGGGA AAAGGCTCTC
GTCTTTGTCG AAGTGAAACA CATGCAGATG ATTCTTGCCG AACTGCTCCA GCAACGCTTC
GATTGCGAAC AGGTGCTCAT CATCAACGGC GAAGTATCCG GCCCCAAACG GCAGGAGAGG
GTGCATGCCT TCCAGACCCG CAAGGGATTT GACGCCATTC TTCTCTCGCC CAAGGCTGCG
GGCGTGGGCC TGACCCTGAC AGCTGCCACG CACGTCATCC ACCTGAACCG CTGGTGGAAC
CCTGCCGTGG AAGACCAGTG TACCGACCGT GCCTATCGTA TCGGCCAGCA ACACGATGTC
ACCGTGCATT ACCCGATGGC TATCCATCCA CAACTTGGCG ACGCCAGCTT CGACGTCAAA
CTGCATGAAC TTCTCGAGCG TAAACGAAGT CTTAGTCGCG ACCTGCTTAC CCCAGCGCCC
GCTGCGGCGA GCGAACTCGA CAGGCTGCTT GCCGATATCA CGGACGGTGC CGCCCATCAT
GATGCAGACC GGACCGACAA GGGCGAAGCG CGCCTTCTGG AATGTCTTGA CCAGATGGAA
CCACTCCGGT TCGAAGCGTG GGTCGCCGAA CGCCTCGAAC GCCTCGGTTT TTCTGTCCAG
CTGACCCCGG CATCCGGCGA TGGCGGTGCC GATGTCATCG CCACGTCGCG CACCCCCGCT
GTCCTCCCCA GCCTGGTCAT CCAGTGCAAG CACACCCAGT CACCAGAACG ACCTTTAGGT
GAAGATGGCA TCATTGAGGT GCTACGCGCG CAAAAACGCT ATACGCTGCC CGGACAGACC
CTGTGCCTTC TTGTAACCAA TGCGAAAAGG CTCACGTCTT CGGCAGTTGA TAAAGCAAAG
GGTGGAGGAG TGGGCGTGCT TATGCGCAGC GATATGTCGG ATTTTGAACG CGGGGGAATG
CCTCAGATTC TGGCAGAACC ACGCTGCACA AGATAG
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| Protein sequence | MTRSLVWQRQ QHGVAFSATE DDALLPVGTW ARQPLSLPNG RIASTGPLLH LLEEEKVTLD
AAETTLTVPD AVLATLDAWQ TDALGLPAHA PVRLTLSAQG TLASAAFRLR YGFTFDDGLP
ATGASIDGVL FHHGKRDYLL PDPLYTIVAR IDAYNAAPLQ DMDERFLWWS ELAALLPDAA
SFPSEFFRQM HTVRPDSFSL DFREEGGRLR ILPRFVRSLH REDNDYGGEL HEDILPAAPN
EDFQRRFFGQ VHPGGRYALP GNWFVVLPPP LRSALEVVHR INGASESEKR QFLHNPRAAI
RERLEAHYGD NAEVVMDSLF QETPLFLSER IKHLGVWEPK GGFYIKTQGG DWFPGDPPPQ
SLLLPIGPQG ALVDVRPADI APIKACIADA KTRGQGAASY NGTTVSTGDA ALSLLERAER
MFVPHAPDNS ATDGPADNSE EMSDDGQVNA NADAPVVPII FDHIDETGVR REAENLRQTV
AAAPFLRPGI ALHEHQHEGL AWLQEHWRHS SPGALLADDM GLGKTLQTLA FLAWVRAQQK
HGVVPGRPFL IVAPTGLLKN WEEEADKFLM EPGLGPVFRA HGGDLRALMA RGTMATAREF
ENSGLVLTTY ETLRDKIAVF IAVHWGVTVF DEAQKIKNPK AMMTDMAKSL KSEFSIALTG
TPVENSLADL WCIMDAVHPM RLETFKAFTG TYMPAGLHST ETLAALKDEL AKPEGFPSLL
RRIKERNWKE RPAKHQNPVR ITMPPEQAQA YRQALNKAVE DAGRPGATLE ALQHIRTIAL
HPFTPAWGTM TPDAFVNASA RLMGTFELLT DIRSKGEKAL VFVEVKHMQM ILAELLQQRF
DCEQVLIING EVSGPKRQER VHAFQTRKGF DAILLSPKAA GVGLTLTAAT HVIHLNRWWN
PAVEDQCTDR AYRIGQQHDV TVHYPMAIHP QLGDASFDVK LHELLERKRS LSRDLLTPAP
AAASELDRLL ADITDGAAHH DADRTDKGEA RLLECLDQME PLRFEAWVAE RLERLGFSVQ
LTPASGDGGA DVIATSRTPA VLPSLVIQCK HTQSPERPLG EDGIIEVLRA QKRYTLPGQT
LCLLVTNAKR LTSSAVDKAK GGGVGVLMRS DMSDFERGGM PQILAEPRCT R
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