Gene Dvul_2903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2903 
Symbol 
ID4664952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3400533 
End bp3401684 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content71% 
IMG OID639821164 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_968341 
Protein GI120603941 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTCA TGCGACTGTT GCCGTTGCTG GGGCTTCTGG CGCTTGCCGC CTGCGGTGAC 
GAACAGGGTG TGCGCGAGGC GTCACGCCCC GTGGGGGTGG AGGTCGCCGC ACCGCTGGAG
GGGGTCACGG GACGCCGCTA CACGGCCACG CTGGAACCGC GTGAACAGGT CTCCGTGGCC
TTCAGGGTCG GCGGCTATGT CGAAGACATC CTCACCGTGT CCGCCGGTGC GGAGGCGAAG
GGGAACAACG CCCGCCGTGT GGATGCCGAA CGTGGAGACC GGGTGCGCAA GGGACAGGTG
CTGGCACGGT TGCGCACGAC CGACTATCAG GGCCGGGTCG CAGCGGCGCG TGGCGCCGTG
GACGAGGCCG TGGCCGCACG GCGTCAGTCA GCGCTGGACC TTGAGCGTCT GGGAACGCTC
CTGCGCGACA AGGCCGTGGC CCAGGCCGAC TATGACCGGG CGCGCGAGAA GGCCGATGCC
ACCGTCGCCC GCGAAGAGGC GGCGCGCGGC AGGCTGGCCG AGGCCCTCGA CCAGTTGCGC
GATACGGCGC TCATCTGCCC GCTGGACGGT GTGCTCACGA AGCGCTCGGT GGAGCGTGGC
ACGCTGGCGA CGCCCGGCAT GGTCGCCTAT GTGGTGGCGG ACATGACGCG GATGAAGGCC
ATGTTCGGCG TGCCCGACAC GCTGGTGGAT GCCGTGCGCC CCGGAGCGCA TCTCGATGTG
CTCGTGCCCT CTGTGGGAGT GGCGCAGCAG GGGCGCGTGA CGGCGGTTTC GCCTGCCGCG
GACAAGCGCA GCCGCATCTT CGATGTGGAG GTGACGCTCG ACAATGCCGG CGGACTGCTG
CGCGAGGGCA TGAGCGCGAC TGTTGAACTG GGGGGCGGCA GTGCCGGCCC CGCACCCGCC
GTTCCGCTGG CGGCGGTGGT GCGCCCTGCC GGGCGTGCCG AGGGCTATGC CGTCTTCGTG
GTGGAAGATG TCGACGGCGG CACGGTGGCG CATGAGCGTG AGGTCGTTCT GGGCACCGTG
GAAGGCAGCC GTGTCGAACT GACGCAGGGC GTCAGGCCGG GTGAGCGCGT CGTGGTGCTG
GGGGCGACCC TGCTCCATGA TGGCGAACAC GTGCGCGTGC TGCCCGGCGG TGCGGAGGTT
GCACCCCGAT GA
 
Protein sequence
MRLMRLLPLL GLLALAACGD EQGVREASRP VGVEVAAPLE GVTGRRYTAT LEPREQVSVA 
FRVGGYVEDI LTVSAGAEAK GNNARRVDAE RGDRVRKGQV LARLRTTDYQ GRVAAARGAV
DEAVAARRQS ALDLERLGTL LRDKAVAQAD YDRAREKADA TVAREEAARG RLAEALDQLR
DTALICPLDG VLTKRSVERG TLATPGMVAY VVADMTRMKA MFGVPDTLVD AVRPGAHLDV
LVPSVGVAQQ GRVTAVSPAA DKRSRIFDVE VTLDNAGGLL REGMSATVEL GGGSAGPAPA
VPLAAVVRPA GRAEGYAVFV VEDVDGGTVA HEREVVLGTV EGSRVELTQG VRPGERVVVL
GATLLHDGEH VRVLPGGAEV APR