Gene Dvul_2847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2847 
Symbol 
ID4664443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3315305 
End bp3316381 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content68% 
IMG OID639821103 
Productpolysaccharide deacetylase 
Protein accessionYP_968285 
Protein GI120603885 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATTG TCGGTTGGAT ATCGATGCGT TTCCGATCGC TTTGCGATGA TGTCACACAG 
GCTGGCTTCG TGCGTCGCGG GTTTTCTCTA GCTGGTGCAG TGGCGCTGGG CTTGTGGGTG
TCATGCATTG CCGCGCCATC GTACGGCCTT GCCGCTGACG GCAGCGACCT GCGTGGAGGT
AAACGGGGGG CTTCCGTCGC TGAAGACCCG ATGGTGTCGC TGGATGCACT GTCAGCCCGC
CTTGAAGCAC GGTTTGGCGG ACAGCGACCC ACGGCGTGGG GCGAACGGCT TCCTGGCGTA
CTCACGCATC TTCCTGCCAC TGCGCTACGC GCTACGCCAT CGCCTACGGG GGACGATTCG
CTTGCACGAC AGCGTGGTGC GACTCCGGCG CAGGGCCTCG CAACCCCGCA TCGGGGCGTA
GCATCCGGTC AACAGGTCCC CACGTCCGGG CAGCTGGCCG ACACAGCCGG GGCGCAGGTC
ATGGCCCTCA CCCTCGATGC CTGCGGTGGC GGCTATGATG CTGGCATCAT AACCATGCTG
CGCCGACTGC GGATTCCGGC GACCCTCTTC GTCACCGGGC GGTGGATACG GGAACACCCC
GACGCCTTCG CCGACCTCGC CGCCGACCCG CTTTTCGAGA TGGCCGACCA TGGTGAACGA
CATCGCCCCG CTTCGGTGAC GGGGCGTAGT GCCTACGGCA TCCGTGGGAC GGTGTCCGTG
CGTGAACTTG TGGAGGAGGT GGAACTTCCT GCGCGAGCCA TTCTTGCCGC CACGGGAAGG
CGCCCCGCCT TCTTCAGACC CGGCACGGCC TTCTGTGATG ATGTGGCGGT GCAGGTGGTG
GGGGCGCTGG GCATGACCGT GGCGGGGTAC ACCGTCGCCG CCGACGCGGG CGCCACCCTG
CCTGCGCCCG CCGTGCGGCG CAACGTGGAG GCCGCGCCGT CCGGGGCCAT TCTGCTGTGC
CACATGAACC GCCCTTCCAG CGGCACGCGT GAGGGGCTGG CGCAGGCCCT GCCCGTCCTG
TTGCAGCGCG GGGTGCGCTT CGTCACCTTG TCGGCGGGTG TGGTGGCCGG GTTGTGA
 
Protein sequence
MPIVGWISMR FRSLCDDVTQ AGFVRRGFSL AGAVALGLWV SCIAAPSYGL AADGSDLRGG 
KRGASVAEDP MVSLDALSAR LEARFGGQRP TAWGERLPGV LTHLPATALR ATPSPTGDDS
LARQRGATPA QGLATPHRGV ASGQQVPTSG QLADTAGAQV MALTLDACGG GYDAGIITML
RRLRIPATLF VTGRWIREHP DAFADLAADP LFEMADHGER HRPASVTGRS AYGIRGTVSV
RELVEEVELP ARAILAATGR RPAFFRPGTA FCDDVAVQVV GALGMTVAGY TVAADAGATL
PAPAVRRNVE AAPSGAILLC HMNRPSSGTR EGLAQALPVL LQRGVRFVTL SAGVVAGL