| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2731 |
|---|
| Symbol | |
|---|
| ID | 4662285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 3187664 |
|---|
| End bp | 3190243 |
|---|
| Gene Length | 2580 bp |
|---|
| Protein Length | 859 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639820985 |
|---|
| Product | pyruvate phosphate dikinase, PEP/pyruvate-binding |
|---|
| Protein accession | YP_968169 |
|---|
| Protein GI | 120603769 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.19402 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTCG GCGAACTCTT CCGCCACTGG ACATACCGGG TCTTTGCCCC CGGCGCACTG
CTGCGCCGCA AATACGAGGC CTTCCGCGAA CTCATCCAGC AGGACGGGCG ATGCCTTGAG
CGCATCGCGG AAATCGAGGA CATCCACTAC GGCAGCACCC ATGTGGACTG GACGCGGGTG
GTGGCCCAGT GCGACGCCCT CGAGACCGAC GTCATGGGCA TGGTCGCCCG GCTGCGCGAG
ATGAACCCCC TGCGCTGGAT GGACCTTGCG GACTATGCCT CGAAGGTGGC CTTCTACGCC
CGCATGGCGG TGAGCATCCC CGAACCCGAC CTCGCCCCGC CCTATGTGCT GCCCCTCTCC
GAGGTGGCGG GCAGACCCGA GGTCGCCGGT CACAAGGCTT CACGCCTTGC CGAGGTGCGC
CAGCGCACCA TGCTGCCCGT GCCCGACGGC TTTGTGGTGA CGGCCTCCGC CTTCCACTAC
ATCATCGAAT ACAACGGGTT GCGTGCCCCT CTCGACGACC TTCTCCGGCA GGTCGACCTT
GCCGATGGCA ACAGCCTCGT CGACCTCTGC CGCACCATGC GTGAACTTGT GCTCACCGTT
GAACTGCCTC CCGTGCTGGA GACGGAACTC CTGGAAGCGG GACACGCCCT CTCGCCGCAA
CGCGCCCCGC TGGCCGTACG GTCGAGCGCG GTAGCCGAAG ACGGCGAGGC GTCGTTCGCG
GGGCAGCACA CCAGCGTACT GGGGGTCGCA CCCGCCGACC TCCCCGACGC CTACCGCACG
GTGCTGGCGG GCAAGTACAC GCCCCGCGCG GTCTCGTACC GCATCATCCA CGGCTTCGCC
GACACCGAGA CCCCCATGGC GGTGCTGCTG ATGCCGCTGG TGCAGGCGAA GGCCTCAGGC
GTCGTCTACA CCCGCGCACC ATCCCCCCCT GCCCGCATCC TCTCCCTTGC GGCCACCGGC
AGGGCCGCGA AAACGTCCGA AGACGACAAC GGCACACCGT CCACCACGGC CACTCCGACG
AAAGCCCCCG ATGCCCCGGC GGCATCGGAC GACTCCGCAG CCGGGGTCAT CGCCATCCAC
ACCGTCGGTG GCATGGGTGC CCCGCTCATG GACGGCAGCA GCGGCGATAC CACGGCATGG
CTGTCACGCG GGGCGCGGCA TCGCATCCTC GAACGGGCGC AGGGGCTGCC GCTGACCACC
GAAGACCTCA AGCGCCTCGC CCGACTCTCC ATGGAACTGG AGACGCTCTT CGGCGAACCG
CAGGACGTGG AGTGGGCCAT CGACGAATCG GGACGCATCT CCATCGTGCA GTCGCGTCCC
GTACCCGGCG CCGCCGTCGC ACCACCGCCG CGCGTCGACG TATCAGGGCT TACCCCCCTG
CTGGAGGGGG CAGACCCCGT GGCCCCCGGC ACCGGATGCG GAACCGTGGT GCATGTGCTC
TCATGTGCCG ACATCGGCGA CCTTCCACCC GGCACGGTGC TGGTCACGCC CTGCCTCGGC
CCCTCGCTGG CGCGCGTCCT CGACCGCATG GAGGGCGTCA TCTCCGTGGA AGGCAGCCGG
GCCTCGCACT TCGCCTCTGT CGCCCGCGAA TCCTCCGTCC CCGTCCTCGT CACGGGCGAC
GACAGCGTGT TCGCCACCCT GCCCGTGGGT ACACTCGTCA CCGTCGACGC GCATGAAGGC
GTCGTGTTCG CCGGACGCCC CGCCACACCG CCGCCCAGAC GCTCATCCCC CGGGGCGATG
GCACTGCGCG GCCCCATGCA CCGCCTGTCG CGGGCCATGC CCCATGTGGC GCGTCTCACT
CTCGTCGACC CGTCGTCCAG TGACTTCGCG CCCGCCAACT GCCGCTCGCT GCACGACATC
GTGCGCTTCT GCCACGAGAT GGCCGTGCGC GAGATGTTCA GCCTCGTGGA ACGTGACGGA
CGCGGCCTTT CGGGTGCCCG CAAGGTGCGT GGCGACATCC CCGTGGTCAT GTACGTGCTG
AACCTCGACG ACGGGTTCTT CCCGTCAGCC ATCGGCAAGC GCGAAATCAC CCCCGACGAT
TTCCGCAGCC TGCCACTGTG GGCGATATGG TTCGGCCTGT CGTCCGAACC TGCGGCGTGG
GCGGCCCTGC CACCCGCCGC CGACTGGGAG GAACTCGACC GCATCAGCGC GGGCATCTTC
CGCCGCGACT CGCCCCAACT CGCCAGCTAC GCCGTGGCAT CGTCCACGTA TGCCAACATC
ATGCTGCGCT TCGGCTACCA CTTCGCCGTC ATCGACAGCC TCTGCGCCGG AGACACCCGC
GCCAACTACA TCCAGTTCAG GCTCAAGGGC GGCGGGGGGC ACGCCGAAGG GCGCAGCCTG
CGTCTGCGCT TCCTGTCACG GGTACTCGAA CAGTCCGGCT TCTCGACACG CATCAAGGGC
GACCTCATCG ACGCCCGCCA CGGCCCCGGC AGCGAAGCCC TCATCCAGAA GCGTCTCGCC
CTGCTGGGCC GGGTGCTGGC CGTGACCCGT CTCATGGACA TCCGTCTCTC CACCGAGGAA
CAGGCCGACG CCGAGGCCGA CAACTTCCTC ACGCGTATCA ACACCCCGGA GGACGACTGA
|
|---|
| Protein sequence | MAFGELFRHW TYRVFAPGAL LRRKYEAFRE LIQQDGRCLE RIAEIEDIHY GSTHVDWTRV
VAQCDALETD VMGMVARLRE MNPLRWMDLA DYASKVAFYA RMAVSIPEPD LAPPYVLPLS
EVAGRPEVAG HKASRLAEVR QRTMLPVPDG FVVTASAFHY IIEYNGLRAP LDDLLRQVDL
ADGNSLVDLC RTMRELVLTV ELPPVLETEL LEAGHALSPQ RAPLAVRSSA VAEDGEASFA
GQHTSVLGVA PADLPDAYRT VLAGKYTPRA VSYRIIHGFA DTETPMAVLL MPLVQAKASG
VVYTRAPSPP ARILSLAATG RAAKTSEDDN GTPSTTATPT KAPDAPAASD DSAAGVIAIH
TVGGMGAPLM DGSSGDTTAW LSRGARHRIL ERAQGLPLTT EDLKRLARLS MELETLFGEP
QDVEWAIDES GRISIVQSRP VPGAAVAPPP RVDVSGLTPL LEGADPVAPG TGCGTVVHVL
SCADIGDLPP GTVLVTPCLG PSLARVLDRM EGVISVEGSR ASHFASVARE SSVPVLVTGD
DSVFATLPVG TLVTVDAHEG VVFAGRPATP PPRRSSPGAM ALRGPMHRLS RAMPHVARLT
LVDPSSSDFA PANCRSLHDI VRFCHEMAVR EMFSLVERDG RGLSGARKVR GDIPVVMYVL
NLDDGFFPSA IGKREITPDD FRSLPLWAIW FGLSSEPAAW AALPPAADWE ELDRISAGIF
RRDSPQLASY AVASSTYANI MLRFGYHFAV IDSLCAGDTR ANYIQFRLKG GGGHAEGRSL
RLRFLSRVLE QSGFSTRIKG DLIDARHGPG SEALIQKRLA LLGRVLAVTR LMDIRLSTEE
QADAEADNFL TRINTPEDD
|
|---|
| |