Gene Dvul_2705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2705 
Symbol 
ID4662669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3150260 
End bp3150988 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content64% 
IMG OID639820954 
Productpolysaccharide deacetylase 
Protein accessionYP_968143 
Protein GI120603743 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.117989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.421806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTAC ACACGCATGA TCGAGAGACT GACATGCCCC ACGCCGCCCT CACGCTCCTG 
TGCTCCCTGC TCTGCCTTGC CTGCCCCATC TCGGCGTACG CCGAAGAAAT TTTCGACGGG
TTCTCGCTTG CCATGCTCGG AGCGCACACA AACACATGCG CCATCACCTT CGATGACGGC
CCCGGGCCAC ACACTCCCCG GCTTCTCGGC ATCCTGCGCG AGCGCAACAT CAAGGCGACG
TTCTTCGTAC TCGGCTCGCG TGTAGCCCGC TACCCGCAGA CCATGCGCGC CATCGCCGCC
GAAGGCCACG AAGTGGGCAA CCATACCTAC AGCCATGTCA ACCTGCGCAA CCTCGCCCCC
GAAACGCAGC GTGACGAGAT AGCCCGCACC GATGCCGCCC TCCTTGAACT CGGCATTCCC
GTGCGCTACC TGCGCCCCCC GTACGGGCGC TACGACAAGA ATACGCTGGA GCAGGCCGCC
ATCGAGAACC TGACCATCGT CATGTGGTCC ATCGACAGCC GAGACTGGCA GAGCCCGCGC
CAACCCATGG CACGGGTGCT TCCCCGCAGC AGTTCGGGCA AGGTGCACGG GGTGTTCCTC
TTCCATGACA ACCACCGCTC CACCGTCGAC GCCATGCCTC GCATCCTCGA CGACCTGGCA
GCTGCGGGGT GTCAGTTCGT CACCCTCTCG GAGTACCTCG ACAACGACGG CCCCGTCTGC
CTGCACTGA
 
Protein sequence
MPVHTHDRET DMPHAALTLL CSLLCLACPI SAYAEEIFDG FSLAMLGAHT NTCAITFDDG 
PGPHTPRLLG ILRERNIKAT FFVLGSRVAR YPQTMRAIAA EGHEVGNHTY SHVNLRNLAP
ETQRDEIART DAALLELGIP VRYLRPPYGR YDKNTLEQAA IENLTIVMWS IDSRDWQSPR
QPMARVLPRS SSGKVHGVFL FHDNHRSTVD AMPRILDDLA AAGCQFVTLS EYLDNDGPVC
LH