| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2685 |
|---|
| Symbol | |
|---|
| ID | 4662836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 3126826 |
|---|
| End bp | 3128175 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639820932 |
|---|
| Product | amine oxidase, flavin-containing |
|---|
| Protein accession | YP_968124 |
|---|
| Protein GI | 120603724 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1232] Protoporphyrinogen oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.327813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0635309 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGTCA AATATCTGAT CGTCGGCGCA GGCCCCACGG GGCTTGGCGC GGCACGTCGC
CTTGCGGAGC TTGGCGAGAA CGACTTTCTC GTGCTCGAAC GCAATGCCTA CGCGGGGGGG
CTCGCGGCCA GTTTCCGCGA CAGCGCGGGC TTCACGTGGG ACATCGGCGG ACACGTCGTC
TTCTCGCATT ACGAGTATTT CGACCGCCTC ATCGAAGAGG CGCTGGACGG CGCGTTCCTC
GAACATATGC GCATCGCGCG GGTGCGCATC GCCGACAGGT GGGTGCCCTA TCCCTTCCAG
AACAACATCC GCCATCTGCC GCAGGACATG CAGTGGGAGT GCGTACAGGG GCTCATGCCC
GGCAAGAGAC CGGAGGCGCA GCCCGTCAAC TTCCGCGAAT GGATAGACTG CGTGTTCGGG
GCGGGTATCG CCAGACATTT CATGGTGCCC TACAACTTCA AGGTGTGGGC CACCCCCGCT
GAACTCATGG ACTACCGCTG GATTGGCGAG AGGGTGAGCG TCATCGACCT TGAGATGGTG
GTGCGCAACA TCATCCTTTC GCTCGATCAG GTGAGCTGGG GGCCGAACAA CGTGTTCCGC
TTCCCCCTGC ATGGCGGCAC GGGTGAGATT TTCCGCCGCA TGGCCGACAG GCTTGGCGAC
CGGGTGCGGC GCAGCACTGC CGTGGTGGGC GTGGATGCCG AGTCGCGTTC CGTGCGGTGC
GCCAACGGCG AGGTCTTCAC CTACGACCAT ATGCTCACCA CCGGGCCGCT CGACCTCCTG
GTGCTGGAAC AGGTCAACGC CGCCTCGGAG ACGCTGCGTG ACGCCGCGCG GCAACTCGCG
CGCAATTCGG TGTACGTGGC GGGTGTGGGC GTGGACGGCA TGCAGGAGGA CGACACCTGC
TGGATGTATT TCCCCGAGGA TACGTCGCCG TTCTACCGGC TGACGAACTT CCACAACTAT
TCGCCCAACA ATGCCGCGTT GCCGGGGCGT TCGCGTGCGC TCATGGCGGA GACGTCGTGG
TCGGCGCACA AGCCCGAGAA GCTCGACACC CTCATGGACA AGACCATAGA AGGGCTTGTA
AACACGACCA TGCTTCGCAA CGAAGAGCGC GACCGCATCC TCTCCACGTG GTCCATCGCC
GTGGACTACG GCTACCCCGT GCCCACCCTC GGGCGCGATG CCGCGCTGTC CACGCTCCAG
CCATGGCTGG AGGCGCGTTC CATCTTCTCG CGCGGCAGGT TCGGCGGGTG GAAGTACGAG
GTCGCCAACA TGGACCATTC GGTCATGCAG GGTGTGGAGT GGGCCGAGCG GATGCTGCTC
GGCAAGGAAG AGACGACGTA TAGGGTGTGA
|
|---|
| Protein sequence | MHVKYLIVGA GPTGLGAARR LAELGENDFL VLERNAYAGG LAASFRDSAG FTWDIGGHVV
FSHYEYFDRL IEEALDGAFL EHMRIARVRI ADRWVPYPFQ NNIRHLPQDM QWECVQGLMP
GKRPEAQPVN FREWIDCVFG AGIARHFMVP YNFKVWATPA ELMDYRWIGE RVSVIDLEMV
VRNIILSLDQ VSWGPNNVFR FPLHGGTGEI FRRMADRLGD RVRRSTAVVG VDAESRSVRC
ANGEVFTYDH MLTTGPLDLL VLEQVNAASE TLRDAARQLA RNSVYVAGVG VDGMQEDDTC
WMYFPEDTSP FYRLTNFHNY SPNNAALPGR SRALMAETSW SAHKPEKLDT LMDKTIEGLV
NTTMLRNEER DRILSTWSIA VDYGYPVPTL GRDAALSTLQ PWLEARSIFS RGRFGGWKYE
VANMDHSVMQ GVEWAERMLL GKEETTYRV
|
|---|
| |