Gene Dvul_2622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2622 
Symbol 
ID4663659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3056146 
End bp3056925 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID639820868 
Productputative 4-amino-4-deoxychorismate lyase 
Protein accessionYP_968061 
Protein GI120603661 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.296225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATACT GGTACAAGGG CGCACTGCAC GAAGGCGGCG TCACCCTCGG CGTGGACAGT 
CCGGCCTTCC GCTACGGGGC CGGGTTCTTC GAGACCCTGC TCTGGAACGG TGCCGAACCG
TGGCTGCTCG ATGCCCACAT CGCCAGACTC GAAGGCAGCC TCGCCCGCTT CTCGGTGGAC
TATCAGCCCT GCGACTACCC GGCTGTCATC GCGCACGTGG TCGAAGCCTG CGGACTGCGC
GACACCACCG CCCGCATCAA CATCCTCGTT CCCATCGAAG ATGCCGATGC AGCTGCCTCG
CCCCTTGTGC TGGCGGCCCC GTGGACACCG CCGCACCCCG ACGCCACCCG CACCCTGCGA
CTGGCCTCGC AACCGGCCCA GTCACCCCTC GGGATGCACA AGTCCATGAA CTATCTTGGC
AACTGGCTGG AACGCCGCGC GGCACTGCGC GACGGCTACG ACGACGTGGT GGTGACATTG
CCCGGCAACA TCGTCCTTGA GACCACCACC GCCGCCCTGC TTTTCAGCGA CGGCACCAAC
TATTGCGCCC CGGCAGGACT CACACGGCTA CGCAGCACGA CCCTCGATGC GGCGCGCACC
GTACTGCCCG TTCACGACTG CACCATCCGT GTGGCCGAAC TCTTCTCGTT CCGGCATGCC
TACATGCTCA ACGCCCTTGT GGGCATGCTG CCTGTCAGGG CCATCGGAAC CCATGCCTAC
GATGTGGACG CGGCCCCCTG CGCCCGTCTG CGTCCGCTGT TGCTGGGACT GCACGACTGA
 
Protein sequence
MTYWYKGALH EGGVTLGVDS PAFRYGAGFF ETLLWNGAEP WLLDAHIARL EGSLARFSVD 
YQPCDYPAVI AHVVEACGLR DTTARINILV PIEDADAAAS PLVLAAPWTP PHPDATRTLR
LASQPAQSPL GMHKSMNYLG NWLERRAALR DGYDDVVVTL PGNIVLETTT AALLFSDGTN
YCAPAGLTRL RSTTLDAART VLPVHDCTIR VAELFSFRHA YMLNALVGML PVRAIGTHAY
DVDAAPCARL RPLLLGLHD