| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2580 |
|---|
| Symbol | |
|---|
| ID | 4664291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 3010767 |
|---|
| End bp | 3011786 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639820828 |
|---|
| Product | KpsF/GutQ family protein |
|---|
| Protein accession | YP_968022 |
|---|
| Protein GI | 120603622 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.597133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000162693 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGTACGTTT GCTGCCCGGA TGGGCATCCA GTCAGACGGG CTCAACTTAC GAGTAGAGCC
AACGACAAAA ATATCCCAAA AATCAACTTC GCCGCCTCAG TATTGCAACA GGAAGCCCAC
GCACTGACTT TGTTAGCGCG CGGGCTGGAT ACATCTTTTT GTGATGCTGT GGATTGCCTG
TACGGCATAA GCGGAAGAAT TGCCGTCACA GGCATGGGTA AAAGTGGGCA TGTAGGCCGC
AAGGTGGCAG CCACGCTGGC GTCAACAGGC TCGCCAGCCT ATTTTATCCA TCCCAGCGAA
GCCAGTCACG GTGATCTAGG CATGTTGGTT TCCAACGATG CGGTTCTGGC CTTTTCTAAT
TCCGGCAACA CAGCGGAACT TTCTGATATA ATTTTATATT CAGCGCGGCG CGGCATTCCT
TTGATAGGCG TGACCCGCAA CTCGGACAGC CTCCTAGGCA AGCATTCCAC CCATCTCCTG
TTGCTGCCGC TTGTGCCGGA GGCCGATCCT CTGGGCTGCG CTCCTACCAC ATCCACGACT
CTGCAAATGG CACTAGGTGA CGCCTTGGCT CTGACGCTGA TGTGTCATCG CGGCTGTTCT
CCTGAAGAAT TCCACCGCTG GCATCCAGGC GGTTCTCTCG GACGCAAGCT GCTGACAGTC
AAAGAAATTA TGCACAGCGG TGCTGAAGTG CCATTGATTT CTTCGTCCAC GCCCATGCCC
GAGGTTTTGT GCCTGATGAC TGGCAAGGGC TTCGGTGTAG CCGGAATTCT CGAAAAGGAC
CGTCTTGTGG GCATTATCAC CGACGGCGAC CTGCGCCGTC ACATGGGGAT TACTCTTATG
GACAAAACGG CTCGGCAGGT CATGCACCCT GATCCCGTAG TAGTTGATGA GGGTACCCTT
GCGGTAGCCG CACTGCGTCT CATGCAAAAA AATCAAATTA CTTCCCTGTT CGTGACTCGG
AAAGGGGAAC CAGTGGGTAT CCTGAACGTT CATGACTGCC TTCGCGCAGG GGTAGAATAA
|
|---|
| Protein sequence | MYVCCPDGHP VRRAQLTSRA NDKNIPKINF AASVLQQEAH ALTLLARGLD TSFCDAVDCL
YGISGRIAVT GMGKSGHVGR KVAATLASTG SPAYFIHPSE ASHGDLGMLV SNDAVLAFSN
SGNTAELSDI ILYSARRGIP LIGVTRNSDS LLGKHSTHLL LLPLVPEADP LGCAPTTSTT
LQMALGDALA LTLMCHRGCS PEEFHRWHPG GSLGRKLLTV KEIMHSGAEV PLISSSTPMP
EVLCLMTGKG FGVAGILEKD RLVGIITDGD LRRHMGITLM DKTARQVMHP DPVVVDEGTL
AVAALRLMQK NQITSLFVTR KGEPVGILNV HDCLRAGVE
|
|---|
| |