Gene Dvul_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2546 
Symbol 
ID4664134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2974559 
End bp2975326 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content65% 
IMG OID639820795 
ProductABC transporter related 
Protein accessionYP_967989 
Protein GI120603589 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.587605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.140243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA ACGCAACACC CATCCTGCGG GTTGAACATC TTTCCGTGGC CCTTGGCGGT 
CGTCCCATCC TCCGTGACGT GTCCCTCGAT GTGGACAGGG GACAACTCAA GGTGCTCATC
GGGCCTTCGG GGGCGGGCAA GAGCACTCTC CTGCAGTGCA TCAACCATCT CATCCTGCCC
GATGCCGGCA CGGTGTCGCT GGAAGGGCGC GCCGTCGACG CTCACCGCAA GGCCGACCTC
TATGCCTTCA GGCAGCAGGT TGGCATGATC TTTCAGGAAT TCAACCTGTT CGACCACCTC
GACGCGCTCT CCAACGTGAG CATCGCGCTG CGCAAGGTGC GCGGCATGAG CCGCACTGCC
GCCCGTGAGC GGGCCATGGC CGAGCTCGAG CGTGTGGGGC TTTCTTCGCG TCATGCCCTT
TACCCCGCAC AGCTTTCGGG CGGGCAGAAG CAGCGTGTGG CCATCGCGCG CGCCCTAGCC
ATGGACCCCA AGGTGATGCT GCTCGACGAA CCCACCTCCG CCCTCGACCC TGAACTGGTG
GGCGAAGTGC TGGCGGTCAT CCGCGACCTC GCCAAGGGGG GCATGACCAT GGTCATGGCC
ACGCACCAGA TGGACTTCGC GCGCGCCCTC GCCAACGAGA TCGTGTTCAT GGAGCGCGGC
GCCATCATCG AGCGGGGTTC GCCCGCCGAA CTGCTGGCAC CCGGCGCCGG AACCCGTACG
CAGGACTTCT GCAGTCGCCT CACCGACCTG TGCGAGGAGA GCTGCTAG
 
Protein sequence
MTDNATPILR VEHLSVALGG RPILRDVSLD VDRGQLKVLI GPSGAGKSTL LQCINHLILP 
DAGTVSLEGR AVDAHRKADL YAFRQQVGMI FQEFNLFDHL DALSNVSIAL RKVRGMSRTA
ARERAMAELE RVGLSSRHAL YPAQLSGGQK QRVAIARALA MDPKVMLLDE PTSALDPELV
GEVLAVIRDL AKGGMTMVMA THQMDFARAL ANEIVFMERG AIIERGSPAE LLAPGAGTRT
QDFCSRLTDL CEESC