Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2536 |
Symbol | |
ID | 4663999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 2963819 |
End bp | 2965645 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639820785 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_967979 |
Protein GI | 120603579 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0520244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.20942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGC TCCATCTGAA CAGAGCCTCC ACAAGGGTAA GGCTTGAGAA CAGAGACAAT CCCGAACTGT ATCGCGACAT CTTCCCCTAT TCGAAGATAA GCCGCGTGGA GTTCGACGAC ATCTTTCTGA TGCCGCGCCC CGCCGAGCCC ATGTTCATCA CCGACACGAC GTTCCGCGAC GGCCAACAGG CCCGCCCGCC GTACACCGTG AAGCAGATGG CCCATATGTA CGACCTGCTC CACAAGCTGG GCGGGCGTAG CGGGCTCATC CGCGCCTCCG AGTTCTTCAT GTACTCGCAG AAGGACCGCC GGGCCATCGA GGCATGCAGG GCCAAGGGCT ACAAGTTCCC GCGCATCACG GGCTGGATAC GGGCCAACGT CGACGACCTC AAGATCGCGC GGGACATGGA GTTCGATGAA GTGGGGATGC TGACCAGCGT GTCGGACTAC CATCTCTACC TCAAGCTGGG TCTCGACCGC GAGAAGGCTC TTCAGAACTA CCTCAAGGTG GTGGGACAGG CCCTTGAATG GGGCATCATC CCGCGCTGCC ACTTCGAGGA CATCACCCGC GCCGACATCC CCGGCTTCTG CCTGCCCTTT GCGCAGAAAC TCATGGAGAT GTCCAAGGAC AGCGGCCTGC CGGTCAAGAT ACGGCTGTGC GACACCATGG GCTACGGGGT GCCCTATCCG GGTGCCACCC TGCCACGTTC CGTGCAGCGC ATCGTGCGCG CCTTCACAGA CGAGGCCGGC GTCCCAGGCG AATGGCTCGA ATGGCACGGG CACAACGACT TCCACAAGGT GCTCATCAAC GGCGTCACGG CGTGGATGTA CGGATGCGCC GGGGTCAACT GCACCCTTCT CGGCTTCGGC GAACGCACCG GCAACACGCC CCTCGAAGCC CTCGTCATCG AATACATCTC GCTCACCGGC GACGACGACG CGGCCGAGAC GCAGGTCATC TCGGAAATCG CCCACTACTT CGAGACCGAA CTCGACTACC GCATCCCCGA CAACTACCCG TTCGTCGGCA AGGACTTCAA CGCCACCAGC GCCGGCATCC ATGTGGACGG CCTCGCCAAG AACGAGGAAA TCTACAACAT CTTCGACACG CGCAAGATTC TCAACCGCCC GGTGCCCATC ATCATCACCG ACAAGTCGGG CCGCGCCGGG GTCGCCTACT GGATCAACCA GTACCTCGGT CTGCCCGTCG AGAATCAGGT GTCGAAGAAG CACCCCGCCG TGGGACACAT CTACAACAAG ATCATGAAGG CCTACGAAGA CGGCCGCAAC ACCTCGTTCT CCAACAAGGA GATGCAGACG CTGGTGCGCC GCTTCATGCC CGAGCTGTTC GGCTCCGAGT TCGACCAGAT CAAGAAGATG GCGGGCGAGC TCTCGGCGGG CCTCATCATC AAGCTGGCCA AGGAATGCCA GATCATGGGC GTGGGCGACG ACAAGTACCC CTGCATGCGC GAGTTCGTGC AGGAATACCC CTTCATCCAG TACCTGTACC TCACCGACAA CCGCGGCAAG CTGCTCTCGG CAGCCATCAC CGACCCGGCC TATCAGGCGA AGTACGACCA GCTGCCCATC GGCTACGACT TCTCCAACCG CCAGTGGTTC ATCAGGCCCA TGCAGACCGG TGAACTGCAC ATCACCGACG TGTACCAGTC TCAGTTCACA GGGCAGCTCA TCCTCACCGT CTCCACGGCG GTCACGGACG AGCACGACAA CATCACCGGC ATCATCGGTG CCGACATCCA GATAGAGCAA CTGCTGCGCC GTGCCGACGC CATCGAGGAT GACGTGGCAC AGGACGAGGA CGAATAG
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Protein sequence | MTLLHLNRAS TRVRLENRDN PELYRDIFPY SKISRVEFDD IFLMPRPAEP MFITDTTFRD GQQARPPYTV KQMAHMYDLL HKLGGRSGLI RASEFFMYSQ KDRRAIEACR AKGYKFPRIT GWIRANVDDL KIARDMEFDE VGMLTSVSDY HLYLKLGLDR EKALQNYLKV VGQALEWGII PRCHFEDITR ADIPGFCLPF AQKLMEMSKD SGLPVKIRLC DTMGYGVPYP GATLPRSVQR IVRAFTDEAG VPGEWLEWHG HNDFHKVLIN GVTAWMYGCA GVNCTLLGFG ERTGNTPLEA LVIEYISLTG DDDAAETQVI SEIAHYFETE LDYRIPDNYP FVGKDFNATS AGIHVDGLAK NEEIYNIFDT RKILNRPVPI IITDKSGRAG VAYWINQYLG LPVENQVSKK HPAVGHIYNK IMKAYEDGRN TSFSNKEMQT LVRRFMPELF GSEFDQIKKM AGELSAGLII KLAKECQIMG VGDDKYPCMR EFVQEYPFIQ YLYLTDNRGK LLSAAITDPA YQAKYDQLPI GYDFSNRQWF IRPMQTGELH ITDVYQSQFT GQLILTVSTA VTDEHDNITG IIGADIQIEQ LLRRADAIED DVAQDEDE
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