Gene Dvul_2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2505 
Symbol 
ID4663433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2925679 
End bp2926755 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content64% 
IMG OID639820754 
ProductNADH dehydrogenase (ubiquinone) 
Protein accessionYP_967948 
Protein GI120603548 
COG category[C] Energy production and conversion 
COG ID[COG3261] Ni,Fe-hydrogenase III large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA CCATCATTCC TTTCGGCCCG CAGCATCCGG TTCTGCCGGA GCCCCTGCAC 
CTGAAGCTGG TCGTCGAGGA CGAGACCGTG GTCGAAGCCA TTCCGGCCCT CGGCTACGTC
CACCGCGGCC TCGAGACCCT CGCCTCCATC CGCGACTACA ACCAGATGGT CTACGTGGTC
GAGCGCGTGT GCGGCATCTG CTCGTGCATC CACGCCATGT GCTACTGCCA GTCGCTCGAG
TGCATGATGA ACGTCGAAGT GCCCCGTCGC GCCAAGGTCC TGCGCACCAT CTGGTCGGAA
CTGCACCGTA TCCACAGCCA CCTGCTGTGG CTCGGTCTCT TCGCAGACGG CTTCGGCTTC
GAGAGCCTGT TCATGCAGTT CTGGAAAGTG CGCGAGCGCG TCATGGACAT CAACGAAGCC
ACGGCGGGCA ACCGCGTGGT CATCTCCACC AACATCGTGG GTGGTGTGCG CCGCGACCTG
TCGCCTGAAC ACCAGAAGTG GATTCTCGAC GAGATGAACC ACCTCGAACG CGAAATCCGC
GCCCTGATGA CCACCATCCT CGACGACTAC ACCGTGTGCA AGCGCACCAA GGGTGTGGGC
GTGCTCACCG CACAGCAGGC CATCCAGCTT GGTGCAGTCG GCCCCATGCT GCGCGGCAGC
GGCGTGGCGC AGGACGCCCG CCAGCTGCAG TACGCGGCCT TCGACGAACT CGACTTCGAA
CCCATCGCCG TACCCGACGG CGACTCGTGG GCACGCTGCA AGGTGCGCTT CCTCGAAGTG
CTCCAGTCGG TGGACCTCGT GCGTCAGGCC ATCTCCAAGC TTCCGGACAC CGAACTCTCC
GTGAAGGTTC CCGGCAAGCC GGAAGGTGAA GTCGTGGCGC GTGTGGAACA GCCGCGTGGC
GAGCTCATGT ACTACGTCAA GGGTAACGGC TCGAAGCACC TTGAACGTGT ACGCATCCGC
ACTCCCACAT TCGCCAACAT CCCGCCGCTG CTCGCCATCA TGGGCGGTCT GCAACTGGCG
GACGTGCCCG TGGCGGTACT GTCCATCGAC CCGTGCATCA GCTGCACAGA GCGCTAG
 
Protein sequence
MSRTIIPFGP QHPVLPEPLH LKLVVEDETV VEAIPALGYV HRGLETLASI RDYNQMVYVV 
ERVCGICSCI HAMCYCQSLE CMMNVEVPRR AKVLRTIWSE LHRIHSHLLW LGLFADGFGF
ESLFMQFWKV RERVMDINEA TAGNRVVIST NIVGGVRRDL SPEHQKWILD EMNHLEREIR
ALMTTILDDY TVCKRTKGVG VLTAQQAIQL GAVGPMLRGS GVAQDARQLQ YAAFDELDFE
PIAVPDGDSW ARCKVRFLEV LQSVDLVRQA ISKLPDTELS VKVPGKPEGE VVARVEQPRG
ELMYYVKGNG SKHLERVRIR TPTFANIPPL LAIMGGLQLA DVPVAVLSID PCISCTER