Gene Dvul_2457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2457 
Symbol 
ID4662856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2859732 
End bp2860526 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content67% 
IMG OID639820705 
ProductABC transporter related 
Protein accessionYP_967900 
Protein GI120603500 
COG category[V] Defense mechanisms 
COG ID[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.310276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.489928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTC AGCCTCTTCT CGAATTCGAC GACGTGAGTT TCAGCTACCC CGGCGGGACG 
GGGCTTTCGG GCATCACACT GGCGGTGCAT CGCGGCGATT TCGTCCTCGT GGGCGGGCCC
TCGGGGGGTG GCAAGTCGAC GTTGCTGCGT CTTGCCGTGC GCTTCGAAGT TCCTGCCTCG
GGCGTCATCC GGTATGACGG CATCCCCGTC GAAGGACTGG CCCCGCAGGT GCTCCGGTCG
CGGATGGGAC TCGTGCAGCA GACGCCCACG GTGGCGGAGG GCACGGTGCG CGACAACCTT
CTGCTGCCGT TTTCCTTCGC CGTGCATGCC AAGCGCCCCC GGCCCGTCGA TGAGGACATC
GTGACATGGC TGCATCGTTT CCGGCTTGAG GGTGTGACCC CCGACACTGA GGCGTCCACG
CTGAGCGTGG GCCAGCGGCA GCGCCTGTGC TGCATCCGTA CGCTGTTGAC GGGGCCGGAG
ATGCTGCTCA TGGACGAACC CACCAGTGCG CTGGATGCCG AAAGCCGCGA GGTGGTGGAG
GATATCGCAG AAGCCTGCAA TGCCGCGGGG GTGACCATCC TCATGGTCAA TCACACCGAC
TACAGGCCGC GATGTAGGAA CGCCCGCCGC ATCGAGGTGC AGGGGGGCAG GCTGACTGGT
GAAGAGGCCA TCGTGGGGTG CCGCCCATGT GCGGTGTCGC AATCGCCCGG GACATCGGCA
CCTTCAGGGG CGCCCACGCC GATCGTGTCG TCTGCTTCCG CTGACGGCAA CGGTGGGGTG
GAGGTGCGAC CGTGA
 
Protein sequence
MTPQPLLEFD DVSFSYPGGT GLSGITLAVH RGDFVLVGGP SGGGKSTLLR LAVRFEVPAS 
GVIRYDGIPV EGLAPQVLRS RMGLVQQTPT VAEGTVRDNL LLPFSFAVHA KRPRPVDEDI
VTWLHRFRLE GVTPDTEAST LSVGQRQRLC CIRTLLTGPE MLLMDEPTSA LDAESREVVE
DIAEACNAAG VTILMVNHTD YRPRCRNARR IEVQGGRLTG EEAIVGCRPC AVSQSPGTSA
PSGAPTPIVS SASADGNGGV EVRP