| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2438 |
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| Symbol | |
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| ID | 4663581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 2835835 |
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| End bp | 2838117 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639820686 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_967881 |
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| Protein GI | 120603481 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.365635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATA TATTCAACGC CATGCGCGTC ACCGCCACTG TCGGCGGCAA GGAGATCGTC
TTCGAGACAG GTCGCCTCGC CAATCAGGCC GATGGTGCCG TGTGGATACA GTGCGGCGGT
ACCGTGGTGC TCGTCACCGC GTGCTCGCAA GCCACTGACC GCGACCTCGG CTTCTTCCCG
CTCACCGTCG AATACTCCGA GAAGATGTAC GCCGCCGGCC GCATCCCCGG CAGCTTCTTC
CGCCGCGAGA TCGGCCGCCC CAGCGAGCGC GAGACCCTCG TCTCCCGCCT CATCGACCGC
CCCATCCGCC CGCTCTTCCC CAAGGGCCTC AAGGATGAGG TGCAGGTGCT CGCCAACGTC
ATCTCCTCCG ACCAGAACAA CGACTCCGAC GTGCTCGCCG TCACCGGCGC CTCCACCGCA
CTCGGCCTGT CGTCCATCCC GTTCGACGGC CCGGTCGCCG GTGCGCGCAT CGGTCGCATC
GACGGTCAGT TCGTCATCAA CCCCACCATC AAGGAGATGG AGCGCAGCGA CCTCAACATC
GTGCTCGCCG CCTCGCGTGA TGCCGTGGTG ATGGTCGAAG GCGAAGCCAG CTTCGTGCCC
GAAGCGGTCA TCGTCGAAGC CCTCGAATGG GGTCACAAGG AAATCCAGCC CCTCATCGAC
GCACAGCTGA AGCTGCGCGA GATGGCTGGC AAGGCCAAGC GCGAGTTCAC CGCACCGGTC
GAAGATGCAG ACCTTGCCGC ACGTGTGGCC GCCCTTGCCA CCGCAGACCT TGACGTAGCC
CTTCGCATTC CCGAGAAGAT GGCCCGCAAG GATGCCCGCA AGGCCGTCAA GGAGAAGGTG
ATGGAGGCCC TTGTGGCCGA CCCCGCCTAC GCCGAAGACA CCACTCCGCT GCGCGCCGTG
GGCGACATCC TCTCTGCGCT TGAGAAGCGC ATCGTGCGCG AACGCATCGT GCGCGAAGGC
CGCCGCATCG ACGGTCGCGA CACCACCACC GTTCGCCCCA TTCTCATCGA AGCGGGCATC
CTGCCCCGCG CCCATGGTTC CGCCCTGTTC GCGCGCGGCG AGACCAAGTC GCTGGTCGTG
GCCACCCTCG GCAGTTCCAC CGACGAACAG CGCATGGACT CGCTGACCGG CGACGTCACC
AAGCGCTTCA TGCTGCACTA CAACTTCGCC CCCTACTGCG TGGGTGAAGT GAAGCCCGTG
CGCGTCTCCC GCCGCGAAAT CGGCCACGGC GCACTGGCCG AAAAGGCCCT GCGTCCCATC
CTGCCCCTCG GCGAAGACTT TCCCTTCACC CTGCGCGTGG TCGCCGAGAC GATGGAATCC
AACGGTTCGT CGTCCATGGC CGCCGTCTGC GGCGGTTGCC TCTCGCTGAT GGACGCCGGT
GTGCCCATCA CCGCCCCTGT GGCCGGTGTG GCCATGGGCC TCATCAAGGA GGGCGACCAG
TACGTGGTGC TCACCGACAT CCTCGGTGAC GAAGACGCCC TCGGCGACAT GGACTTCAAG
ATAGCCGGTA CCAGCGAAGG CATCACGGCT GTCCAGATGG ACATCAAGGT CAAGGGACTG
CCCACCGATG TCATGGCCCG CGCCATGCAG CAGGCCCGTG ATGCGCGCCT GCACATCCTC
GGCGAGATGG GCAAGGTTCT CGAAGCCCCC CGTGCCGAAC TTTCCGCCTA CGCGCCGCAG
CATGCCGAGG TGTTCGTCAA CCCCGACATC ATCCGCATCA TCATCGGCCC CGGCGGCAAG
AACATCAAGG CCATCACCGC CACCACCGGC GCGTCCATCG ACATCGAGGA CAGCGGCCGT
GTCTCCATCT TCGCGCCCAC GCTCGAAGCC ATGGAAATGG CCCGCGAGAT GGTGCAGTAC
TACGACCAGC GCGCCGACAT CGGCAAGAAC TACACCGGCA AGGTGCGCAA GGTCCTCGAA
ATCGGCGCCA TCGTCGAAAT CCTGCCCAAC CTCGAAGCCC TCGTGCACAT CTCGCAGCTT
GACACCAACA GGGTCGAGCA GGCGTCCGAC GTGGCCCGCC TCGGCGAGGA CATGGTCGTG
AAGGTCATCG AGATCAACGG CGACCGCATC CGCGCCAGCC GCAAGGCCGT CCTGCTTGAA
GAGCAGGGCA TCGAATGGAA GCCCGAAGAC ACCGCTCGCC CCTCCGGTCC CCGCGAAGGC
GGACGCCGTG ACGGCGGGCG CGATGGTCGC CGCGACGGCG GTCGTGACGG TCGCCGTGAT
GGCGGACGTG ACGGTGGTCG CCGCGATGGC GGACGCCGCG ACGGCGGACG CGACCGCAAC
TAG
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| Protein sequence | MTNIFNAMRV TATVGGKEIV FETGRLANQA DGAVWIQCGG TVVLVTACSQ ATDRDLGFFP
LTVEYSEKMY AAGRIPGSFF RREIGRPSER ETLVSRLIDR PIRPLFPKGL KDEVQVLANV
ISSDQNNDSD VLAVTGASTA LGLSSIPFDG PVAGARIGRI DGQFVINPTI KEMERSDLNI
VLAASRDAVV MVEGEASFVP EAVIVEALEW GHKEIQPLID AQLKLREMAG KAKREFTAPV
EDADLAARVA ALATADLDVA LRIPEKMARK DARKAVKEKV MEALVADPAY AEDTTPLRAV
GDILSALEKR IVRERIVREG RRIDGRDTTT VRPILIEAGI LPRAHGSALF ARGETKSLVV
ATLGSSTDEQ RMDSLTGDVT KRFMLHYNFA PYCVGEVKPV RVSRREIGHG ALAEKALRPI
LPLGEDFPFT LRVVAETMES NGSSSMAAVC GGCLSLMDAG VPITAPVAGV AMGLIKEGDQ
YVVLTDILGD EDALGDMDFK IAGTSEGITA VQMDIKVKGL PTDVMARAMQ QARDARLHIL
GEMGKVLEAP RAELSAYAPQ HAEVFVNPDI IRIIIGPGGK NIKAITATTG ASIDIEDSGR
VSIFAPTLEA MEMAREMVQY YDQRADIGKN YTGKVRKVLE IGAIVEILPN LEALVHISQL
DTNRVEQASD VARLGEDMVV KVIEINGDRI RASRKAVLLE EQGIEWKPED TARPSGPREG
GRRDGGRDGR RDGGRDGRRD GGRDGGRRDG GRRDGGRDRN
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