Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2422 |
Symbol | |
ID | 4664192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 2818471 |
End bp | 2820567 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639820670 |
Product | flagellar hook-associated protein FlgK |
Protein accession | YP_967865 |
Protein GI | 120603465 |
COG category | [N] Cell motility |
COG ID | [COG1256] Flagellar hook-associated protein |
TIGRFAM ID | [TIGR01396] flagellar basal-body rod protein FlgB [TIGR02492] flagellar hook-associated protein FlgK |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.314403 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCATCT CCTCGCTGTT CAACCTCGGC TGGAATGCGC TCAACGGTGC ACAGAGTGCC ATCCAGACCA CCGGCAACAA CATTGCCAAC GTGAATACCC CCGGGTACTC GCGTCAGGAG GTGCGCTTCG AGGAGGCTCC CACGCTGGAC AAGTTCGGCG GGCAGATGGG GCAGGGCGTC TACGCCGCCG AAGTCATACG GCATTTCAAC AAGTTCCTCT TCTCGTCGTA CCTCGACAAG TATTCCACCC AGCAACGGTG GGAGAAGCAG TACGAGGAAC TGCAAGGGGT GGAGAACCTC TTCAACGAGG CCAACACCTC CGGCATCAAC GCGGCCCTGA CCACGTTCTT CAACGATTGG CAGGAACTCT CGAAGCGGCC GGACGACAAG TCGGTGCGGG AGGCGCTGCT CGCCCATAGC GACAACCTCA CCAAGCTCAT CCGCAACGCC GACGACACCA TGCTGCGCAT GCAGCAGGAA ATCGACCAGC AGATAGGGCA GGATGTGGAC GCGGTGAACG ACATGCTGCG CTCCATCGCC GACATCAACC GTCAGCTCAA CATCCACGAT GACCCGGGCC GCAACAACGC CAACACGCTC TACGACCAGC GCGACCAACT CGTCCGCAAG CTGGCCGAGA AGCTCGACGT CACCGTGGTG GACAACGGCG GCGGCAACTA CACTGTCAAC ACCAAGGCGG GGCAGACCCT CGTCGACGGC ACGGTGGCCT ATGAACTGCG CTTCGACGGG CCCAAGTCCG AGGCGCAGCT GACCACCACG TCGGCTTTCG ACGGGACGCT GGAGTTCACA GGAAGCGACA GTTCGGAATA CACCCTTGAA GTGGTCACGG GCGGGGCTGT CGGCACGGCC ACCTACCGTG TGTCGCTCGA CGGCGGGCAG ACGTGGCTGA AAGATGCCGA CGGCAACGAA CTGCATTACA CGACGCAGAC GTCTCCCACC ACAGAGCGGG TCAAGGGACT CGACATCTCC TTCACCGGGG CCACACAGCC CATGTCGGCG GGTGACCGGT TCACCATCAC GCCCAAGAGC GGCCTGTACT GGGTGACGCC CACGCGCGAC CCCCTCAACG TGACCCCGCA GGCCCTTTCC GACGGTACGG ACAACACTTC GCGCATCACG GGCGGGTCGC TTGGCGCCCT CTTCACCGTG CGGGACGACA AGATAGGCGA ATACCGCGAT AAACTCGACG CCTTCGCCAA CACCCTCATG TGGGAAGTGA ACCGCATCCA TTCGCAGGGC GCGGGCCTTG AGAAACTGGC GCAGTCTGCG GGTACGACCA AGGTGCCCAA CACCACGGCC TCACTCGGTT CACCCACGGC GGGCATCAAT TTCCACGACC GTTTGCAGGA TGGCAACATC GGCATCTATG TCTACGACAA GACGACCGGG GCCGTGGTCA ACTCCGGTTC CATCGACTTC TCGTCGGTGG TCCCGCCCGG ACTCGCCAAC TTCAGCAAGG ACGACCACAG CCTTCAGGAT GTGGTCGACG CCATCAACAA CGACGCAAAG TTCACGGGCC TCATCACCGC CAGCATCAAG GACGGCAAAC TCGTTGTGGA CGGTGTGGGC GACAATGTCT TCTCGTTCGG GGCCGACTCC ACAGGGGTGC TTGCGGCGCT AGGCCTGAAC ACCTTCTTTC AGGGGTCGGG TGCCGCCGAC ATAGCCCTGC GTCCCGAGTT GCGCCAGAAC ACCGGGCTCA TCAATGCCGG TCAGGTGAAC GGCGCGAGCG AGGGCAACTC CGGCGACAAC AACAGCGCCA AAGAGATTGC GGCCCTCGCC ACCAAGAAGG TCACGGTGTC GATGTTCAGT TCGAACTCGG GCAACCAGTC GCTTTCGGAG TTCTACAGTT CCATCGTCGC CGTGGTGGGT GCCGATACCG CCTCGGCGAA GTTCAACAAG GCCTTCCATC AGGCCATGTC CGACGACATC GACTCGCGCA TGTCGTCCGT CTCCGGGGTG AACCTCGACG AGGAGATGGC AAGCCTCGTG AAGTTCCAGC ATTCGTACAA GGCCGCAGCC AAACTCGTGA CCACGGCGGA CGAGATGTTC CAGGTGCTGC TGGGGCTGAA GCAGTAG
|
Protein sequence | MSISSLFNLG WNALNGAQSA IQTTGNNIAN VNTPGYSRQE VRFEEAPTLD KFGGQMGQGV YAAEVIRHFN KFLFSSYLDK YSTQQRWEKQ YEELQGVENL FNEANTSGIN AALTTFFNDW QELSKRPDDK SVREALLAHS DNLTKLIRNA DDTMLRMQQE IDQQIGQDVD AVNDMLRSIA DINRQLNIHD DPGRNNANTL YDQRDQLVRK LAEKLDVTVV DNGGGNYTVN TKAGQTLVDG TVAYELRFDG PKSEAQLTTT SAFDGTLEFT GSDSSEYTLE VVTGGAVGTA TYRVSLDGGQ TWLKDADGNE LHYTTQTSPT TERVKGLDIS FTGATQPMSA GDRFTITPKS GLYWVTPTRD PLNVTPQALS DGTDNTSRIT GGSLGALFTV RDDKIGEYRD KLDAFANTLM WEVNRIHSQG AGLEKLAQSA GTTKVPNTTA SLGSPTAGIN FHDRLQDGNI GIYVYDKTTG AVVNSGSIDF SSVVPPGLAN FSKDDHSLQD VVDAINNDAK FTGLITASIK DGKLVVDGVG DNVFSFGADS TGVLAALGLN TFFQGSGAAD IALRPELRQN TGLINAGQVN GASEGNSGDN NSAKEIAALA TKKVTVSMFS SNSGNQSLSE FYSSIVAVVG ADTASAKFNK AFHQAMSDDI DSRMSSVSGV NLDEEMASLV KFQHSYKAAA KLVTTADEMF QVLLGLKQ
|
| |