| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2404 |
|---|
| Symbol | |
|---|
| ID | 4664568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 2803046 |
|---|
| End bp | 2803834 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639820652 |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_967847 |
|---|
| Protein GI | 120603447 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.167076 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGTAA ACTTGCCGTT AAGTTGGATC GCTCGAGACA AGCGGTGGTT CAGGCTTTTC
ATAGAAAGGC GCATCAATCC CGAATTCGGG ATGGACACGG TGGCGGTGCA GGACCTCCCC
GAGTCGTGGC ATCGTGAGAC GGCAGCCATG CTGGGTGCCG AAGGGCTGGC TTGCGGGGTG
CATCTGCCCT TCTTCGACCT GCATCCGGGC AGCTTCAATG ACGCCATCCT TGCCGCCTCA
CGCGAAACCT TGCGTCGGGC AGCTACACTG GCGTCACTGT ATGCGCCACA TCATATGATA
GGGCATGTGT CATGGGACGG CAGCCAGCAC GGTGCCGATG CCGCCCGCTG GCTTGAACGG
TCTGCGGGGA CGTGGGAAGG GGTGCTGGCG GTCTCGGAGG CGAGGCTGTG CCTTGAGAAC
ACACACGAGC GAAGCCCGGA GCATCTTCGG AGGGTTGTCG ATGCGTTGCC GGTGGAAAGG
GCAGGCATCT GCTTCGATGT GGGGCACTGG TTCAGCTTCG CGGGGGGTAT CGCCCGTGAC
GACCTCGACC GATGGCTTGA TGCCTTCGCG CCTCGCCTCA GCCATCTGCA TCTTCATGAC
AATGACGGCA GTGGCGACCA GCATCTCGGG CTGGGGGCCG GACGCATCCC GCTGGCGGCG
TTCTTCGAGG GGCTTGAACG GCGAGGGGTC AAGCCTTCAG CGACGCTGGA ACCGCATGAC
GAAGTGGCCT TCGAACAGTC GCTTGCGTGG ATGCGCGCGC GACCGGAGGT CATGACGTTG
CTCGGGTGA
|
|---|
| Protein sequence | MFVNLPLSWI ARDKRWFRLF IERRINPEFG MDTVAVQDLP ESWHRETAAM LGAEGLACGV
HLPFFDLHPG SFNDAILAAS RETLRRAATL ASLYAPHHMI GHVSWDGSQH GADAARWLER
SAGTWEGVLA VSEARLCLEN THERSPEHLR RVVDALPVER AGICFDVGHW FSFAGGIARD
DLDRWLDAFA PRLSHLHLHD NDGSGDQHLG LGAGRIPLAA FFEGLERRGV KPSATLEPHD
EVAFEQSLAW MRARPEVMTL LG
|
|---|
| |