Gene Dvul_2092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2092 
SymbolaroL 
ID4662892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2432124 
End bp2432651 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content68% 
IMG OID639820335 
Productshikimate kinase II 
Protein accessionYP_967535 
Protein GI120603135 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.300334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0606791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTCGG AAGTGTGCCG GGTCTTCCTC ATCGGAGGCA GGGCCAGCGG CAAGAGTACG 
GTGGGCAGGG CGCTCGCCGC AAGGCTTGGA TGGGATTTCG CGGATACCGA CGCCATGGTG
ACGCGGCGTG CCGGGTGCGA CATCGCCACA CTGGTGGCGG AACGCGGGTG GGATGCCTTC
CGTGACATGG AGAGTGACGC CCTGCGTGAT GCCGCAGCGC GTGAACGTGT CGTCGTCGCC
ACAGGCGGGG GCATGGTGCT GCGTGCGGAG AATAGGGCGC TGCTGCGCGA GGCGGGGGTC
ACCGTGTTCC TGTCGTTGCC TGTCGAGGTC GTGGCGGCGC GGCTTGCCCG CAACCCGGAA
CATGGGCAAC GCCCCTCACT GACCGGAAAG GCCGTGGCGG ACGAGGTGGC GGACGTGATG
CGCGAACGGG CACCTCTCTA TGCCGAGGCG GCTCGCCATG TGGTGCGCGG CGATGCGCCC
GTGGCGTGCA TCGTCGAGGA CATCACCGCG CTGCTTGCCT TTTCGTGA
 
Protein sequence
MGSEVCRVFL IGGRASGKST VGRALAARLG WDFADTDAMV TRRAGCDIAT LVAERGWDAF 
RDMESDALRD AAARERVVVA TGGGMVLRAE NRALLREAGV TVFLSLPVEV VAARLARNPE
HGQRPSLTGK AVADEVADVM RERAPLYAEA ARHVVRGDAP VACIVEDITA LLAFS