| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2073 |
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| Symbol | truA |
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| ID | 4664208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 2409669 |
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| End bp | 2410562 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639820316 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_967516 |
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| Protein GI | 120603116 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0650804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGCC TCAGACTGAC CATCGCCTAC AAGGGCACAG ACCTGCATGG CTGGCAAGTT
CAGGAACATG CCACACGCCC GCGCCCCCGC ACCGTTCAGG GAGTGCTCGA ACCCATCGTC
TCGCGCATGG CAGGTGAACA GGTCCGACTC CATGCCGCAG GACGTACCGA CGCGGGAGTC
CATGCCGACG GGCAGGTGGC GCACGTGGAC ATCCCCGACC ACAAGCTTGA TGTCGACTGG
CAGAAGGCCA TCAACGCCCA GTTGCCTGAC GACATCTGCA TCCTCGATGT GCGCCGCGCA
GCCGACGACT TCCATGCCCG CTTCGATGCC CTTGGCAAAC GCTATACCTA CAGGCTGTGG
CTGACGCGCC GGTTCATCCC CCCCAAGCTT CACGGTCAGG TGTGGGCCAC CGGCCCCCTC
GACGTCTATG CCATGGACAG GGCGGCGCGC CACCTTGCGG GCACGCACGA CTTCGCAGCC
TTCCAGAATC AGGGGACCGA CGTCACCTCG ACGGTGCGAA CCGTCCATGC CATCAGGCGC
TGCCCCTCAG GGACATTGCC AGCCGGGGCC CTGCTCACGT ATGGCGAACC ATACACCTCA
TGGCGATGCA CGGGAACGCA CCCTGACCAG CCTCCCGCAA CGGCTGGACA TCCGCTGGCG
GGCATCGGGC TTGAGCTTGT GTGGTCCTTC GAGGGGGACG GGTTCCTCAA ACAGATGGTG
CGCAACATGA TGGGTCTGCT GGTGGCTGTA GGACGCGGTG CCCTCGCCGC CGATGACGTG
CCGGGCATCA TGGCGACCCT CGACCGTTCG CGGGCCCCTG CCACCGCGCC AGCCTGTGGG
CTCACACTTT CGGAAGTCTA TTATCCACCT TGCGACTACC CCTACGCCCG CTGA
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| Protein sequence | MARLRLTIAY KGTDLHGWQV QEHATRPRPR TVQGVLEPIV SRMAGEQVRL HAAGRTDAGV
HADGQVAHVD IPDHKLDVDW QKAINAQLPD DICILDVRRA ADDFHARFDA LGKRYTYRLW
LTRRFIPPKL HGQVWATGPL DVYAMDRAAR HLAGTHDFAA FQNQGTDVTS TVRTVHAIRR
CPSGTLPAGA LLTYGEPYTS WRCTGTHPDQ PPATAGHPLA GIGLELVWSF EGDGFLKQMV
RNMMGLLVAV GRGALAADDV PGIMATLDRS RAPATAPACG LTLSEVYYPP CDYPYAR
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