| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2056 |
|---|
| Symbol | obgE |
|---|
| ID | 4662529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 2396676 |
|---|
| End bp | 2397776 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639820299 |
|---|
| Product | GTPase ObgE |
|---|
| Protein accession | YP_967499 |
|---|
| Protein GI | 120603099 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0536] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.520405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.906933 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTCG TAGACGAGGC GACCATCAAT GTACGTGCGG GTAAAGGCGG CAATGGCTGT
CTTTCGTTCC GGCGTGAGAA GTTCATCCCC CGCGGGGGGC CGGACGGCGG TAACGGCGGC
GATGGCGGCA GCGTCATCCT GCGGCCAACC AACAGGCTGC TCAGCCTGTA CGACTTCCGG
TTGCAGCGCA ACTACGAAGC CCGCAACGGG CAGTCGGGCA TGGGCAGCCA GTGCGACGGG
CGCAAGGGCG AGGACCTTGT CCTTGAACTG CCGCTGGGCA CGCTCGTCTT TGAAGTCGAT
GACGAAGGGC ACGAGCAGAT GATCGCCGAC CTGAGCGACC CGGACGGTGT GTTCGTGGTG
GCACGGGGCG GTCGTGGCGG CAAGGGCAAC GAGCATTTCA AGTCGTCCAC CATGCGCGCT
CCCCGTTTTG CCCAGAAGGG CGAACCGGGC GAGGAGCGGC GGCTCAGACT TGAGCTGAAG
ATACTCGCCG ATGCCGGTCT GCTTGGCTTG CCCAACGCAG GCAAGTCCAC GTTCATCTCG
CGCATATCTG CGGCCCGGCC CAAGATCGCG GCGTATCCGT TCACCACGCT TACGCCCAAC
CTCGGCGTGA TGATCGACGA GGTCGACCCC GACCGCCGCA TGGTCATCGC CGACATCCCC
GGTCTCATCG AAGGTGCCCA TACCGGACAG GGACTCGGAC ACCGTTTTCT CAAGCACGTG
GAGCGCACCC GCTTTCTCGT GCATATTCTC AGCATAGAGG ATATCGACCC GGAGAATCCG
TGGACGGGCT TCGACCTCAT CAACGAGGAA CTTGCACGAT TCGACGAGGT GCTGCGCGAA
CGCGAGCAGA TCGAGGTCGT CAACAAGATC GACCTGCGCA CCCCGGAAGA GGTCGACGCG
CTGCGCCAGC AGGCTGCGCA GCAGGGGCGG CGCATCTTCT TCATCTCTGC CATGCACGGT
GAAGGTATCG AAGAGGTCGT GGATGCCATG TGGCGTCTGC GCGACACCAT CGATATGCAC
GAACCGCTGG TGCACCTGCA GGAAGTCGAG GAAGAGGACG AGGAGTTCGA GGATATCGAG
GTCGTATACA CCCGCGAATA G
|
|---|
| Protein sequence | MRFVDEATIN VRAGKGGNGC LSFRREKFIP RGGPDGGNGG DGGSVILRPT NRLLSLYDFR
LQRNYEARNG QSGMGSQCDG RKGEDLVLEL PLGTLVFEVD DEGHEQMIAD LSDPDGVFVV
ARGGRGGKGN EHFKSSTMRA PRFAQKGEPG EERRLRLELK ILADAGLLGL PNAGKSTFIS
RISAARPKIA AYPFTTLTPN LGVMIDEVDP DRRMVIADIP GLIEGAHTGQ GLGHRFLKHV
ERTRFLVHIL SIEDIDPENP WTGFDLINEE LARFDEVLRE REQIEVVNKI DLRTPEEVDA
LRQQAAQQGR RIFFISAMHG EGIEEVVDAM WRLRDTIDMH EPLVHLQEVE EEDEEFEDIE
VVYTRE
|
|---|
| |