Gene Dvul_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2024 
Symbol 
ID4662499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2353715 
End bp2356741 
Gene Length3027 bp 
Protein Length1008 aa 
Translation table11 
GC content65% 
IMG OID639820267 
ProductGlu/Leu/Phe/Val dehydrogenase, C terminal 
Protein accessionYP_967467 
Protein GI120603067 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2902] NAD-specific glutamate dehydrogenase 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.203605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.826831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCTAC CAAATACAGT CAGGAGGGAG CCCATGACTG ACGCATCCCG TTCCGGCACG 
GCGACCGCAC TCCATGAGGA CGCCGTGTCA GGTTCAGCCG CCGCAGAGGC CCTCGACCTC
GTCCGGCGCG GTCTGGACGA CATGGCAGGT CAGGTCGTGC CGTGGTTTTT CGGCAACATG
CCCGAGTACT ACCTGCGCAC CCATTCGGTG ACCGAGAAGG TGCACCATCT TCAGGCCATC
ATCTCGGGCC GGGCCGTCAC CGGCAGTCAG ACGGTGCGCC TCATGGCGCC GGACGGACGC
AAGGCCACGT ATCTGGTGCC GGGCGGGGGC ACGAAAGAAC TTCTGACCAT ACTCGAGGCG
CATGTCGCCC AGGAGATAGA GACCGCCCGC CTCTATACGA CGCAGGACGG GCAACTGCAC
CTTGTCGAGT TTCTCTTCGG TGAACAGCCC CGTGCGGAGG TCGCCGGCGA CCTGTTCGCC
GAGGCGGTGT CCGCCATGCG CGGCGAGGGC GTGAGTGGAG ACCGGATAGA CCTTTTCGAG
CGAATGCTGC GTGGTGCCAA CGCCGAATAT CTAGAGAAGT TCGACCCTCA GCGGGCCCTG
CGTCACCTGC ATATGCTCGA ATCGGTGGGC CGCAGCGAGG ACACGGCCAT CCTGCTCGAA
CAATGCACAC CCGGTAGCGA GACGCGCCTT GTCATGGCCA TGCGCCATCC CCCGGCGACC
GGACTGCTGC TGCAGACGGC GAAGATACTG GCGCGCACGG GCGTGACGGT GAACCGCTGC
TACGGTGACA GCTTCAACCT CGACGATGGC GACTCGTTCG CCATTCTCAG CTTCTACGTC
AACGTGGGCG GGGACATCCT GCATGAGGAT TCGGAATTGT GGCAACGGTT GCGCCGCAAG
CTGCAGCTGG TGAAGTGGTT CGCCCCGAAT CCGTTCGAGT CGTACGCCGA CCGTGAAGGC
TGGTCGCTGA AGCGCGTGAT GCTGCTTGCC GCCGCTGCCG AGTTCGCCCA CGCCTTTCTT
GTGCAGGAGA ACCAGTGGGC CTACAGCACC AACAACGTCA CCCGCATCCT GCAGGAGAGG
CGCGGCGAGG TGGCGCGGCT TGTGGCATGG TTCGAAGCCC GGTTCGACCC CACGCTGGGC
GGCAGGGAGG CGAAGGCGCG TGAACTTGAC GAGGCCGCAC TGGCGGCGGT GGGCGATGTG
GCGGACGAGA GCGAACGGAC GGTGCTGCTC ATGGTCCATC GCTTCTTCGC CTTCACCCTG
CGCACCAACT ACTTCCTCGA AGACATCTAC GGCCTCTCGT TCCGTCTCGA CCCGCAGTTC
CTTCCTGCCC CGTGCCGCAT CGAAGGCGAA GAACTGCCCT ATGGCATCTT CTTCTTCCAC
GGCCCCTACT GCATGGGGTT CCACATCCGC TACCGCGACA TGTCGCGCGG CGGGGTTCGC
GTCGTCCCCA CCCGGTCTGC GGAGCAGTTC GAACTGGAGT CGAACCGCCT CTACGACGAG
GTCAAGGGAC TGGCCTACGC ACAGCAGGTC AAGAACAAGG ACATCCCCGA AGGCGGGTCC
AAGGCGGTCA TCCTTCTCGG GCCGCTCGGT GACATAAGGC TCGCCGTGGC GAGCATGGGC
AACTCCCTGC TGGACGTCAT CCTCTGCGGC GAGAGTTCGC CGACGCTCCC CGGCGTGGTC
GACCATCTGG GCAAGGAGGA GATCATCTAC CTCGGCCCGG ACGAGAACAT CACGCCGGAG
CACATCACGT GGATCGTGGA ACGCGCCCGG CAGCGCGGCT ACCGCTGGCC TTCGGCGTTC
ATGAGTTCGA AGCCGGGGGC GGGCATCAAC CACAAGCAGT ATGGCGTGAC GAGCCTCGGG
GTGATGGTCT TCGCGGAAGA GGTGCTGCGG CATCTTGGCA TCGACCCTGC CACGCAGCCG
TTCACGGTGA AGATCACTGG CGGCCCCAAG GGTGACGTGG CGGGCAATCT CATGCGCATC
ATGTTCCGCG ATTACGGGGA CAACGCCCGT GTCGTCGCCG TCACCGACGG GCATGGTGCC
GCCTACGACC CCGAAGGGCT CGACCGTGCC GAACTCATGC GTCTGGTGGA CGGGCAGCGC
AGCATCGACG CCTTCGACGC GGCACTCCTG CGCGGGGAGG GCGCCTTCGT CGTCTCCGCC
CGCGACCCGG AGACGGTGCG CCTGCGCAAT GCACTGCACA ATACGGCGCG GGCGGACATC
TTCATTCCCT CGGGAGGCCG GCCCAACACC ATCAACATGC GCAACTGGCA CGAGTTCTTC
GATGGTGACG GCGTGCCCAC GGCCCGCGCC ATCGTGGAGG GGGCCAACCT CTTCGTGTCG
CCCGATGCGC GCAAGCGTCT GGCGGAACGC GGCGTGCTTG TCGTGCACGG TTCGTCGGCG
AACAAGACGG GGGTCATCTG CTCGTCGTAC GAGGTGCTGG GCGGTCTGGT CATGACGGAT
GGCGAGTTCA TTGCCGCCAA GGAACGCTAT GTGGCAGACG TGTTCGACAT CCTGCGTCGC
CGCGCCCGCG ACGAGGCCCG CCTGCTGCTG GCCGAGTTGC GTCGCTGCGA CAGGTGCAAG
CCGCTGCATG TCATCTCCGT GGAGGCTTCG CAGGAGATGA ACCACGCGGC CGACGCCCTT
TACGGGGCCT TCATGCAACG ACAGCCCGAC ATCGCGGAAG ATTCCCTGTG GCGCGGACTG
GTGCTCGACT ATTGCCCCGC CGTGCTCGTC GAGAAGTTCC GCGACCGCAT CTTCGACATG
GTGCCCCGGC GGCACCTGTA TGCGCTCATC GCCGCCTATG CGGCTTCGGC CATCGTCTAC
GCCGAGGGTA TGGGATGGCT TGCAGGAGTA GGGACGCAAC GCGATATCGT CGATGTGGTG
CGCAACTGGC ACGAGGCGAG GGCGCTCATG CTGCGCCTTG CCACCGCCGT CGAGTCCACG
GACATGGAGC AGTCCGCGCA GGTGGCGCAC CTGTTGCGGC ATGGCGGCGT TCGGCGATTC
ACGGAAGAGC GCCTCGGGCT TGCCTAG
 
Protein sequence
MVLPNTVRRE PMTDASRSGT ATALHEDAVS GSAAAEALDL VRRGLDDMAG QVVPWFFGNM 
PEYYLRTHSV TEKVHHLQAI ISGRAVTGSQ TVRLMAPDGR KATYLVPGGG TKELLTILEA
HVAQEIETAR LYTTQDGQLH LVEFLFGEQP RAEVAGDLFA EAVSAMRGEG VSGDRIDLFE
RMLRGANAEY LEKFDPQRAL RHLHMLESVG RSEDTAILLE QCTPGSETRL VMAMRHPPAT
GLLLQTAKIL ARTGVTVNRC YGDSFNLDDG DSFAILSFYV NVGGDILHED SELWQRLRRK
LQLVKWFAPN PFESYADREG WSLKRVMLLA AAAEFAHAFL VQENQWAYST NNVTRILQER
RGEVARLVAW FEARFDPTLG GREAKARELD EAALAAVGDV ADESERTVLL MVHRFFAFTL
RTNYFLEDIY GLSFRLDPQF LPAPCRIEGE ELPYGIFFFH GPYCMGFHIR YRDMSRGGVR
VVPTRSAEQF ELESNRLYDE VKGLAYAQQV KNKDIPEGGS KAVILLGPLG DIRLAVASMG
NSLLDVILCG ESSPTLPGVV DHLGKEEIIY LGPDENITPE HITWIVERAR QRGYRWPSAF
MSSKPGAGIN HKQYGVTSLG VMVFAEEVLR HLGIDPATQP FTVKITGGPK GDVAGNLMRI
MFRDYGDNAR VVAVTDGHGA AYDPEGLDRA ELMRLVDGQR SIDAFDAALL RGEGAFVVSA
RDPETVRLRN ALHNTARADI FIPSGGRPNT INMRNWHEFF DGDGVPTARA IVEGANLFVS
PDARKRLAER GVLVVHGSSA NKTGVICSSY EVLGGLVMTD GEFIAAKERY VADVFDILRR
RARDEARLLL AELRRCDRCK PLHVISVEAS QEMNHAADAL YGAFMQRQPD IAEDSLWRGL
VLDYCPAVLV EKFRDRIFDM VPRRHLYALI AAYAASAIVY AEGMGWLAGV GTQRDIVDVV
RNWHEARALM LRLATAVEST DMEQSAQVAH LLRHGGVRRF TEERLGLA