Gene Dvul_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2009 
Symbol 
ID4663073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2340738 
End bp2341802 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content62% 
IMG OID639820252 
Productdihydroxyacetone kinase subunit DhaK 
Protein accessionYP_967452 
Protein GI120603052 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2376] Dihydroxyacetone kinase 
TIGRFAM ID[TIGR02363] dihydroxyacetone kinase, DhaK subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.324635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC TGATCAATGC GGTGGAGAAT GTGGTGCGCG AGCAATTGCA GGGCATGGCT 
GCCGCCCACC CTGAGCTTCG GGTGAACATC GACCCGCATT ACATATGCAG GGCTGACATC
CCCGACGGCA AGGTGGCCAT CGTCTCTGGT GGCGGCAGCG GGCACGAACC CATGCACGGG
GGCTTCGTAG GCCATGGCAT GCTTGACGGC GCCTGTCCTG GCGAGGTGTT CACATCTCCC
ACCCCAGACC AGATGTATGA ATGCGCCAAG GCAGTCGACC GTGGCGCGGG TGTACTGTTC
ATCGTCAAGA ACTACACCGG CGACGTGATG AACTTCGAAA CGGCCGCTGA ACTGTGCCAT
GCCGACGGCA TCAAGGTGCA GAACATCCTC ATCGATGACG ACGTGGCCGT GAAGGACAGC
CTGTACACGG CTGGACGGCG TGGCGTGGGA ACCACCGTGC TGGCCGAGAA GATAGTGGGT
GCCGCCGCCG AGGCGGGGTA CGACCTCGAC AGGTGCGCCG ACCTGTGCCG CAAGGTGAAC
CGGTATGGTC GCTCCATGGG CATGGCACTC ACGTCGTGCA CGGTACCTGC CGCAGGGAAA
CCCACCTTCG AACTCGCCGA GGACGAAATC GAGATCGGCA TCGGCATTCA TGGTGAGCCG
GGAACACAGC GCGCAGCCAT GATGACCGTG GATGAACTCG TGGAGGTCAT GGCTACCGCC
ATCATCGACG ATCCCGCGTA CACCCGCACC GTGCGCGAAT TCGACCGCGC TGCCGGCGAC
TGGGTGGAGA AGTCGCTGAC GGACGAACCC TTCGCCAAGG GCGACCGGGT CATCGCCTTC
GTCAACAGCA TGGGGGGCAC GCCGGTGAGC GAACTGTACG CCGCCTACCG CAAACTGGCG
GAAATCTGCG ACAGGCGTGG CATCGTCATC GTGCGCAACC TCATCGGGCC GTATATCACC
TCACTCGAGA TGCAAGGCTT CTCCATCACC CTGCTGAAGG TCGACGACGA AATGCTCGCG
TTCTGGGATG CGAAGGCGGT CACACCCGGC TTGCGCATGG GGTAA
 
Protein sequence
MKKLINAVEN VVREQLQGMA AAHPELRVNI DPHYICRADI PDGKVAIVSG GGSGHEPMHG 
GFVGHGMLDG ACPGEVFTSP TPDQMYECAK AVDRGAGVLF IVKNYTGDVM NFETAAELCH
ADGIKVQNIL IDDDVAVKDS LYTAGRRGVG TTVLAEKIVG AAAEAGYDLD RCADLCRKVN
RYGRSMGMAL TSCTVPAAGK PTFELAEDEI EIGIGIHGEP GTQRAAMMTV DELVEVMATA
IIDDPAYTRT VREFDRAAGD WVEKSLTDEP FAKGDRVIAF VNSMGGTPVS ELYAAYRKLA
EICDRRGIVI VRNLIGPYIT SLEMQGFSIT LLKVDDEMLA FWDAKAVTPG LRMG