Gene Dvul_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2006 
Symbol 
ID4663139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2336662 
End bp2337321 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID639820249 
Producthypothetical protein 
Protein accessionYP_967449 
Protein GI120603049 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1387] Histidinol phosphatase and related hydrolases of the PHP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.338951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACT TCCACGTCCA CACCACGTTC AGCGACAGCA CCATGACCCC CGCCGTGGCC 
GTGCGCCACG CCAAGATGGC CGGGTATCGC GCCGTGGCAC TCACCGACCA CGCCGACCAT
GCCAACATGG ACCTCATCCT GCGCCAGACC CTGCCGCTGG CCCGCAAGTA CTCACTCTAC
GCGGGCATCG AGGTCTTCGC GGGTGTGGAA CTCACACACG TGCCCCCTGC CCTCATCCCC
GAAGCCGTGC GCGAGGCACG CGCCATGGGC GCGCAGCTTG TGCTGGTGCA CGGCGAGACC
ATCAGCGATG CCGTCGAAAC CGGCACCAAC CTTGCCGCCA TCGAAGGTGG TGTCGACATC
CTGGCCCACC CCGGACTCGT CAGTGACGAG GATGCCGCCT ATGCCGCCGA ACGCGGCGTG
CGCTTTGAAA TCACGACCCG TCCCGGACAC GCCCTCACCA ACGGGCATGT CGCCATGGCG
GCGCGAAGGC ACGGCGTCAG GTGCGTCATC AACAACGACG CCCACCACTC CCGTGATTTC
GTGAACCCCG ACCACCGCCT TGCCGTGGCA CTGGGGGCGG GGCTGACCAC CGCAGAGGTG
ACCGCCGCAG AAGCCGAAAG CCGCACATTG CTGGGCAGGC TGCTGCGCGA AGTCCGCTAG
 
Protein sequence
MIDFHVHTTF SDSTMTPAVA VRHAKMAGYR AVALTDHADH ANMDLILRQT LPLARKYSLY 
AGIEVFAGVE LTHVPPALIP EAVREARAMG AQLVLVHGET ISDAVETGTN LAAIEGGVDI
LAHPGLVSDE DAAYAAERGV RFEITTRPGH ALTNGHVAMA ARRHGVRCVI NNDAHHSRDF
VNPDHRLAVA LGAGLTTAEV TAAEAESRTL LGRLLREVR