| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1915 |
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| Symbol | trmE |
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| ID | 4663958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 2232415 |
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| End bp | 2233788 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639820156 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_967358 |
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| Protein GI | 120602958 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.410866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.314403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCACG ACGACACCAT CGCCGCCATC GCCACGCCAC TAGGTCAGGG GGGCATCGGC
ATCATTCGTA TCAGCGGGCC GGCCAGCCTT GAGGTGCTGC GGGCACTGTT CAGGCCGTCT
TCTTCCCGGT TCGGGGGCTT CAGGCCATGG ACGCTGCATC ATGGAACCAT CACCGACGGG
TGCGACCCCC TCGACGATGT TCTCGCCGTG CATATGCCGG GGCCGCGGAC CTTCACCGGA
GAGGACGTGT CGGAAATCCA CTGTCACGGC GGTTCCGGTG TCCTTGCTGC GGTACTGGAG
GCGTGTGTCA GGCATGGTGC GCGCTATGCG GAACGCGGAG AGTTCACCCG TCGTGCGTTC
CTGAACGGAC GCATGGACCT GACGCAGGCC GAGGCCGTGG CGGAAATGAT CGCCGCGCCG
TCGCGTGAGG GAATGCGCCT TGCGCAGGCA AAGCTGGATG GTCTTCTGGG GCAGAGGGTC
GGCGCGTTGC GTGCCCGTCT GGATGCGTTG CGGATGCAGT TGTGCGTGGC TGTCGATTTT
CCGGAAGAGG AAGTGGAGTG TCTGGCGCCC GAGGCCTTTC TCGCTGAAAT CGAAGCCGTA
CGGCAGGGCG TTGTGGAACT TTCGGCAGGG TATGCCAGAA CCCGATGCTG GCAGGACGGA
GCGCTTGTCG TGCTGGCGGG GCAGGTCAAT GCCGGGAAGT CAAGCCTCAT GAACGCCCTC
CTCGGCAGAC GTCGTGCCAT CGTCACCGAT TTGCCCGGTA CGACCCGTGA CTTCATCGAG
GAGCCCCTGA ACCTGTCGGG CCTTGCCATC AGGCTTGCCG ACACGGCGGG GCTGCGTGAA
ACAGGGGATA TCGTCGAGCA GGAAGGCGTG CGCATGAGCC GCGACCTCGT GGCGCAAGCC
GACCTCGTCC TGCTGGTCAC CGATGCGACG CAAGGTTTGC AGGGGCCGGA ACTCGAACTC
CTGCGTCATG CCGGGCCGGA GAGGGTGCTT GTCGTCTTCA ACAAGACCGA CCTTCTGGAG
GGGCGCATCT TGCCGTCAGC CCCGGAGGGC TGCCGTTCCG TTCATGTGGC CGCAGCCTCG
GGAGACGGGG TCGAATCGCT CGTCACGGCC ATCCGTGCTG CTGTGCTTGC GGCGACGGGT
GCAGGAGAAC CCGAAGCGGG CGAACTCGCC CCCAACATGC GGCAGGCTGC TGCACTGGAC
AAGGCCGCGA CAATCCTCGA TGAACTCGCC GGGGATATAC GGGCGCACGT GCCCTACGAC
CTTTGCGGGG TGCGCCTCGA CGGGGCTTGC GCTGCCCTCA TGGATGTCAC CGGGCAATCC
ACCCCCGAAG CCATCCTCGA CGCCATCTTC GCCAGCTTCT GCATCGGCAA GTGA
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| Protein sequence | MQHDDTIAAI ATPLGQGGIG IIRISGPASL EVLRALFRPS SSRFGGFRPW TLHHGTITDG
CDPLDDVLAV HMPGPRTFTG EDVSEIHCHG GSGVLAAVLE ACVRHGARYA ERGEFTRRAF
LNGRMDLTQA EAVAEMIAAP SREGMRLAQA KLDGLLGQRV GALRARLDAL RMQLCVAVDF
PEEEVECLAP EAFLAEIEAV RQGVVELSAG YARTRCWQDG ALVVLAGQVN AGKSSLMNAL
LGRRRAIVTD LPGTTRDFIE EPLNLSGLAI RLADTAGLRE TGDIVEQEGV RMSRDLVAQA
DLVLLVTDAT QGLQGPELEL LRHAGPERVL VVFNKTDLLE GRILPSAPEG CRSVHVAAAS
GDGVESLVTA IRAAVLAATG AGEPEAGELA PNMRQAAALD KAATILDELA GDIRAHVPYD
LCGVRLDGAC AALMDVTGQS TPEAILDAIF ASFCIGK
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